Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1161 ATGATGGAACTCACCGATTCCGGCGACGAACTCGGGGACCACAAGCTGCCTCAAGATTCTCGCTCTGGACTCGGAATCGACCTCAATGAGATCCCCTCTCCTTCTTTTGCCGAAACCCTACCGGACTCCATCGACATCGTACGCGCGTACCACGAGAACCCGGCGCCTCCGCCCGGTGGACCGGCGGGGATTCCCGGTGACGTCTGTGGCTCCACTTGTGGTGCCTGTGGCAAGCCCGAGGCGCGGGGTCATGTTGTGGTCTGCGACGGGTGTGAGCGCGGCTACCATTTGGGCTGCGCGGGAATGCGTGGACGCCAGGCCGTAAACCTTGACGAGTGGGTCTGTGGAGAGTGTGTGTCCAGTGGGGTGAAGAGTAAGCGTTGGCCATTGGGTGTCAAGTCCAAGCATCTTTTGGATATCAATGCTTCGCCACCCAGCGATGTTGACGGCGAGGGTAGTGAAGAATTGCAGGATTTGAGAAAGCACACTCAGGGTCATAATTCTTTCAGTGCCAACTCATTTGGTGCCCCATTGACATATTCAAACTTCTACAATGGTAATGCTATTGGCTTCCAAAAAGCATCTGGAGTTGTTAGAGTGGGTTTTGAGGATGTATTGAATCATACGCAATCAGTTAGTAGAAATTTTGAGGAGGTAGATATGGGGTTGCCTCCTGGAAGGCATAGGAATAGTAAAAATACAGCTAATGGCAATCCAGGAGAGATAATTTTGCAAGCTCTCAGAGATTTTATATCTGAAAGGCATGGTGTTCTGGAGGAAGGTTGGAAAGTGGAGTTTAGACAACCAATGAGCAGCTCTGAGTTGTATGCTGTTTACTGTGCACCAGATGGAAAGATTTTTGATTCTGTGTTTGAAGTAGCGTGTTATCTGGGGTTGATGCCTGGCTTCAACTCTCTGGAGTCTGAAATGAGAAATGATAGACCTGTCTCTTCATTAGGTGGGTCTCATTTTACCAGAAAAAGAAAGTCAACTAAACTTCCAGTTGCTAATGGCTTTGCTGAAAGAAGGGAAAGCTTTACCAATAGTTGTTTTAAAGATCCTCCTTCGGATGCTGCAAGTGCAGAGTGCGCTAATGCATGTGGGAACATATCAGAAGCCACATTAAGTGGAAAGAAAGAGGACGATCACTCTGGCCCTCAGCAATCTGCTGATGGCCTTCCTTTACAGTTTGAAGATTTTTTTGCTCTTTCTTTGGGAAAGATTGATGATAGACCTTCATATTGTGATGCTAACATTATTTGGCCCGTAGGTTATAAATCTTGCTGGCATGATAAAATTACAGGCTCCATTTTTACATGTGAAGTTCTGGATGGTGGTGATTCTGGACCTATATTTAGGGTCAGAAGGTGTTCCTGTTCTGATTTTTCAATTCCAGTAGGGTCAACCATCCTCTCATTGTCCAACCTTTGTCAATTTGTGAGTCAAACCAATGGAGGTGAGGGAAAGATGAATGATAATATGGAATGTGATGGTGATGATAGTATCCACATGATCCTAGACGACTCTTGCAATCCAACAGAAAATGATGTCTTGAGTTGTCTTGAAAGTTGCTCTAGTGAAGCACATGATAGCCTTACGTTAGATGTATTGCAGTCTGCAGCTGGTTTAGGTCAAGATGAAAGTCATAATTTGTCTGATGACTTGGTGTCAATTGGTGAGATAGTGGTGGACGACTGTTCGTCATCATCAGCATGGAAAGATATTTCCCAAAAATTAATTAATGCTTGCAGTGAAATATTCAAGCAGAAAGGGACTTTAAAGCTCTATTGTAAACATGCTGAAAGAGAAACATACGTACATAAATGGGACATCTGGAATGGGGAAAATGAAACAATCCCCTCTTCATTTGCTAAATTTTGTGGGTCCCCTGCCCTTGGTATACCTGCCATGGTTCATGCACAGAATGATTTTGAAAGTTTGTATGAGGTCTTAAGAAAATGGTTGGAGCAGGATAGATTTGGATTAGATGTAGAGTTTGTCCAAGAAGTACTTGAACTACTTCCTGGTGTTGAAGGATTCTCACGTTATGAATTTCTGAATACTAGAAGTAATATCTCTTCTTTGCTAACTGTTGGAAATGGGTTCTTAGTGGCTGATTGGAGAGGCAGATCCCGATATCAGGAAGAAGCAGGGCAAGGTTTATATAGGAGACACAAGAAAGTGAAATTGGCCAAAGAACGTATTAAGGAAGATCATTGTCCACCTCCTGGGAAGCCTCTATCCTCTAGGGTTCCTTTTGGACTTGTTGGTGATGTTTTTCAGGCTTGGGAACTATTACGCAGATTTCATGAAATTTTGGGCCTGAAGGAACCTTTGTTATTGGATGAGCTGGAGAAGGAACTCATCAACCCATGGTTTAATGGATCAGTGATCAGTGAAAAACTTGAGGGTGTTGGCAGTGGTGGACCAATATCATCCCCAAACTTTGAAGCTGCTCCTTCAGTTTCTGTTGAAAGTCCCCATGCATTTATTCAAGTGGAAACTGAAGCCATGAAAGAGGAAGCCCAAGTTAAGCTTGCATCGTTCACTTACACCAGATGCTTTGGTGCATCTTTGACAAAGGCTCATAATTCCTTGCTGGAGGTTTTAATAGGTGAACTGCAATCCAAAGTGGCTGCCCTGGTGGATCCAAATTTTGATCCTGCAGAGCTGAGAACAAGACGTGGAAGAAGGAAAGACATAGATAGTACTCTTCCTGCAAGACGAGCCAAGCTCAATATTCTTCCTATTAATGAACTAACTTGGCCTGAATTGGCTCATAGATACATATTATCTGTCTTATCAATGGATGGTAACCTTGACTCACAAGAGATTACTGCACGGGAAAGTGGTAAAGTATTTCGCTGCTTACAAGGTGATGGTGGTTTGCTGTGTGGCTCCCTTACTGGGGTGGCTGGGATGGAAGCAGATGCGTTGATAGTGGCATCATTATTGCTTGCGGAAGCTACAAAGAAAATTTTTGGTTCTGTGAGCAGTGAAAGTGATGTGCTTACCTTTGAAGATGAGGAGTTAGATGCAAACAATTCTTGTGAGAAAACTTCGTGGAATGACGGTAATATTCCAGAATGGGCACAGCTGCTAGAACCTGTAAGAAAACTACCAACAAATGTGGGAACCAGAATCAGAAAGTGTGTCAATGATGCCTTACTTAAGGATCCACCCGAGTGGGCTAGGAAAATACTGCAACACTCGATTAGTAAGGAAGTGTACAAGGGCAATGCATCTGGACCTACAAAGAAAGCAGTTCTTTCTGTGTTGGCTGATGTATGTGGTGAAGGGTTGCAACAGAAGCCCAATAAAACAAGGAGAAAAAAGACTGTAATATCTATTTCTGACATTATCATGAAACAATGCCGCATTGTATTACGCCGTGCTGCCGCAGCAGATGATTCCAAGGTTTTTTGCAATTTGCTGGGACGAAAATTGATAAATTCTTCTGATAATGATGATGAAGGGCTCCTTGGATCTCCAGCAATGGTGTCTCGTCCTCTTGACTTCAGGACCATTGACCTACGACTGGCTGCTGGGGCTTATGGTGGATCTCATGAAGCTTTTCTTGAGGATGTTCATGAGCTGTGGAACAATGTTCATATTGCTTTTGGGGATCAACCTGATTTAGTTGAGCTGGCTGACAAATTATCTGAGAATTTCGAATTGTTGTATGATAGTGAGGTCTTAACTTGTGTGCAAAGGTTTGGAGAGTATGCCAAATTGGGAAACTTGAATGTGGAAATGAGAAAGGAAGTGGAAACTTTTCTTGCATCAACTAGTGAAATTCCCAAGGCTCCTTGGGATGAGGGAGTCTGTAAAGTATGTGGCATTGATAGGGATGATGACAGTGTTTTGCTATGTGATACCTGTGATGCTGAGTATCATACTTATTGCTTGAATCCTCCGCTAGCAAGGATCCCTGAAGGAAACTGGTACTGCCCTTCTTGTGTTGACAGTAAACATGCAGTTCAAGATGTTTCACAATGTTCAAAACCTATTGGCAAACCTAGCAGTAAAAAATTCAAGGGGGAGGTTACTTCACTTTGCTTGGAGGCTCTAACTCATCTACTATCTGTAATGGAAGAGAAAGAATACTGGGAGTACAGTGTGGGCGAGAGAACTATCCTTCTCAAATTTTTATGTGATGAGTTGCTCAACTCTTCCCTCATACGCCAGCACCTTGAGCAATGTGTTGAGTCATCTGCTGAATCACTTCAAAAGTTGCGTGCACTTTCTGCAGAGTGGAAAAGCCTGAAAATTAAAGAAGAAATATTATCCAGTAAAGCTGCACAAACTGACACATGCTCACTAGCAACTACTGGAGAAGTTGTCCTCAAGGAGGGGCTTCCGGGATCACTATCTCCTGGTAAAGGCCTGGTTCAGCCACATAGTGCAAGTGACGGTCCTTACAATTTTGGGGTATTTGCTGATAGTGTGCATTCGGAAAAGATAAATAAAGAGAAAAATGGGTTTAATAGTGTGGATAAAAGTGTATCTACAACAAATTCAGAAACTGATAGTCGGAGCAGGAATCCCATAAATGTGGAGGGACAGTTGCAGAGTGTCTGTGCAGTTGTGGATGGCAGTCAGTTGCCTACAAATATGACTTCCTGTGTGGATTATCAACGGGGTGATAAGCCTAGTAATCCTTTTTCAATGGCAATTAATATGCCTCAAGAAAGTAACAGCTCTGGCGGAGCAGTTCATATGCAGGGTAGCTGGCAGAAATTTGAAGGAAGAGATACATCTCTTGATCTACAGGAACAAGGTGTCCCTTTTGATGTTCCCAAGTCTTCTGTAAATGAATCAGAACCATATCACCTCGAGCTCAATTCTATCAGACATGATATCTCACTTCTGCAAGAGTCAATAACAAGTGTTGGATCACAGCTGCTAAAGCTTTCTGTTCGTCGGGAATTTTTGGGAATTGATTCACTTGGTCGCTTTTACTGGGCTTCAGCAATGGCTGGCGGATGTCCGTGTATAATTGCTGATTCAACTGCTCTGATGTGGCATGAGGGAAGAATCACCAATAGCAGAGACCCTGTGGACAAGATTTCTGATACGAAGAATTGTGGACTATCTGGCAAGGAGAGCTATCAGATGTCAGGACTGATGAAAGATTTATCTCCTTTAATGTCTCTACCAAGTAATACTGTAGGCTGTAATTCACCATGGGTTGCTTATCAAACTGATGCTGAAATCGAAGAGCTCTTATGTTGGCTGAAGGATATTGACCCTAGAGAAAGAGAACTTAAAGATTCAATTATGATTTGGCAAAAGTCAAGATGCCAAGAGTTTATTCATATGCAGAATGAAGATCAGTTTGAGCCTCAAGGACTTTGTCCTCTACCTGGGGATAGAGAGAGAATAGTGTCTGATTCTCTTGTTACAAAGGCAACCTCCTTGTTAGAGAAGAAATATGGCCCATTCTTAGAGTTGGGTACCCTTGAGGCGTTGAAGAAGAGGGGTAAAAAGGTAAGAACATCTAATGATGATAAGTTGTATAGGTGCCAATGCCTAGAACCCATATGGCCTTCTAGGCAACACTGCATGTGTTGTCACAAAACCCTTTTGAATGATGTTGAACTGGAGGGACATAATGACGGCAAATGTAGTGCTGCTTTGCCAGCCTCAGAGAAGAATAAAGATATCAGCGGATCTTCTAAAGGGAGAGGTAATTTGAAATTTGAGACCAACCATGAGAGAGTCGGAGGTAATGCAGAAACAGGTGGAACCTCGATGGGTGTAGGTTCTGAGCTGAGATCAAGATTGATCAAGTTTTCGAATCAAGAATCAACATGTCCGTATAACTTTGAGAATGTCTGTTCCAAGTTTGTGACTGAGGACTCCAACAAGGAACTTATTAAAGAAATAGGTCTTATTGATTCTGATGGGATCCCTTCCTTTGTTCCTTCTGTATCTCCTTATGTAAGTGATTCTACAGTTATGCTAATATCAAACAAAAAGGCTGAAAATGTTGCTGGTGGGTCCAAGGCTTCTGAACGGCAGATTCCTAAAGGAAGTGGCACGTGCAATGACCATATATCAGGCATTCCTATTCGAAGTTCCAGTCTTCATGAAAACAATAAAGCAGGAAAATCAAGGAGATCAACTTTGGGATCTGCAGGGCAAAGGGATGGTAAATCTTTATTTTCTGTTCCTGCTTCACAAGTGGGCACTGACAGCTGCTGTGTGGTACCTCAATCTTCATTGAGACCATTGGTTGGGAAAATTTCACATATTTTGAGGTTACTGAAGATTGGCCTACTTGATATGGATGCTGCGCTCTCTGAAGTTGCTTTGAGGCCATCAAAAGCACAGTTGGAAAGAAGACAGGCTTGGCGTTCATTTGTTAAATCTGCAAGGACCATATATGAGATGGTTCAGGCGACTATCACGCTGGAGGACATGATTAAGACAGGGTACTTAAGAAATGACTGGTGGTACTGGTCATCACTCTCAGCCGCTGCCAGATCTTCTACTTTGTCATCCCTTGCCCTTCGAATATACACCCTTGATTCAGCTATTATATATGAAAAAATGTCAAGTTTTACTGATTGCTCAGAACCTTCTGCGGTAGCAGAACAGAAAGCACCAGCCGCTTTGGATACGGAGAAATCCAAAGCAATACGAAAGTCAAGCAGGAAAAGGAAGGAACCAGATGGTTAA 6684 0.4303 MMELTDSGDELGDHKLPQDSRSGLGIDLNEIPSPSFAETLPDSIDIVRAYHENPAPPPGGPAGIPGDVCGSTCGACGKPEARGHVVVCDGCERGYHLGCAGMRGRQAVNLDEWVCGECVSSGVKSKRWPLGVKSKHLLDINASPPSDVDGEGSEELQDLRKHTQGHNSFSANSFGAPLTYSNFYNGNAIGFQKASGVVRVGFEDVLNHTQSVSRNFEEVDMGLPPGRHRNSKNTANGNPGEIILQALRDFISERHGVLEEGWKVEFRQPMSSSELYAVYCAPDGKIFDSVFEVACYLGLMPGFNSLESEMRNDRPVSSLGGSHFTRKRKSTKLPVANGFAERRESFTNSCFKDPPSDAASAECANACGNISEATLSGKKEDDHSGPQQSADGLPLQFEDFFALSLGKIDDRPSYCDANIIWPVGYKSCWHDKITGSIFTCEVLDGGDSGPIFRVRRCSCSDFSIPVGSTILSLSNLCQFVSQTNGGEGKMNDNMECDGDDSIHMILDDSCNPTENDVLSCLESCSSEAHDSLTLDVLQSAAGLGQDESHNLSDDLVSIGEIVVDDCSSSSAWKDISQKLINACSEIFKQKGTLKLYCKHAERETYVHKWDIWNGENETIPSSFAKFCGSPALGIPAMVHAQNDFESLYEVLRKWLEQDRFGLDVEFVQEVLELLPGVEGFSRYEFLNTRSNISSLLTVGNGFLVADWRGRSRYQEEAGQGLYRRHKKVKLAKERIKEDHCPPPGKPLSSRVPFGLVGDVFQAWELLRRFHEILGLKEPLLLDELEKELINPWFNGSVISEKLEGVGSGGPISSPNFEAAPSVSVESPHAFIQVETEAMKEEAQVKLASFTYTRCFGASLTKAHNSLLEVLIGELQSKVAALVDPNFDPAELRTRRGRRKDIDSTLPARRAKLNILPINELTWPELAHRYILSVLSMDGNLDSQEITARESGKVFRCLQGDGGLLCGSLTGVAGMEADALIVASLLLAEATKKIFGSVSSESDVLTFEDEELDANNSCEKTSWNDGNIPEWAQLLEPVRKLPTNVGTRIRKCVNDALLKDPPEWARKILQHSISKEVYKGNASGPTKKAVLSVLADVCGEGLQQKPNKTRRKKTVISISDIIMKQCRIVLRRAAAADDSKVFCNLLGRKLINSSDNDDEGLLGSPAMVSRPLDFRTIDLRLAAGAYGGSHEAFLEDVHELWNNVHIAFGDQPDLVELADKLSENFELLYDSEVLTCVQRFGEYAKLGNLNVEMRKEVETFLASTSEIPKAPWDEGVCKVCGIDRDDDSVLLCDTCDAEYHTYCLNPPLARIPEGNWYCPSCVDSKHAVQDVSQCSKPIGKPSSKKFKGEVTSLCLEALTHLLSVMEEKEYWEYSVGERTILLKFLCDELLNSSLIRQHLEQCVESSAESLQKLRALSAEWKSLKIKEEILSSKAAQTDTCSLATTGEVVLKEGLPGSLSPGKGLVQPHSASDGPYNFGVFADSVHSEKINKEKNGFNSVDKSVSTTNSETDSRSRNPINVEGQLQSVCAVVDGSQLPTNMTSCVDYQRGDKPSNPFSMAINMPQESNSSGGAVHMQGSWQKFEGRDTSLDLQEQGVPFDVPKSSVNESEPYHLELNSIRHDISLLQESITSVGSQLLKLSVRREFLGIDSLGRFYWASAMAGGCPCIIADSTALMWHEGRITNSRDPVDKISDTKNCGLSGKESYQMSGLMKDLSPLMSLPSNTVGCNSPWVAYQTDAEIEELLCWLKDIDPRERELKDSIMIWQKSRCQEFIHMQNEDQFEPQGLCPLPGDRERIVSDSLVTKATSLLEKKYGPFLELGTLEALKKRGKKVRTSNDDKLYRCQCLEPIWPSRQHCMCCHKTLLNDVELEGHNDGKCSAALPASEKNKDISGSSKGRGNLKFETNHERVGGNAETGGTSMGVGSELRSRLIKFSNQESTCPYNFENVCSKFVTEDSNKELIKEIGLIDSDGIPSFVPSVSPYVSDSTVMLISNKKAENVAGGSKASERQIPKGSGTCNDHISGIPIRSSSLHENNKAGKSRRSTLGSAGQRDGKSLFSVPASQVGTDSCCVVPQSSLRPLVGKISHILRLLKIGLLDMDAALSEVALRPSKAQLERRQAWRSFVKSARTIYEMVQATITLEDMIKTGYLRNDWWYWSSLSAAARSSTLSSLALRIYTLDSAIIYEKMSSFTDCSEPSAVAEQKAPAALDTEKSKAIRKSSRKRKEPDG 2227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1161 2227 Pfam Methyl-CpG binding domain 249 300 IPR001739 GO:0003677
Lele13g1161 2227 ProSitePatterns Zinc finger PHD-type signature. 73 118 IPR019786 -
Lele13g1161 2227 ProSitePatterns Zinc finger PHD-type signature. 1276 1320 IPR019786 -
Lele13g1161 2227 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1231 1334 IPR013083 -
Lele13g1161 2227 ProSiteProfiles Zinc finger PHD-type profile. 70 121 IPR019787 -
Lele13g1161 2227 MobiDBLite consensus disorder prediction 1492 1515 - -
Lele13g1161 2227 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 67 138 IPR013083 -
Lele13g1161 2227 Pfam Bromodomain 1164 1218 IPR001487 GO:0005515
Lele13g1161 2227 CDD Bromodomain 1121 1225 - -
Lele13g1161 2227 SUPERFAMILY FYVE/PHD zinc finger 72 130 IPR011011 -
Lele13g1161 2227 MobiDBLite consensus disorder prediction 1 24 - -
Lele13g1161 2227 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 1355 1399 IPR028942 -
Lele13g1161 2227 SUPERFAMILY FYVE/PHD zinc finger 1261 1327 IPR011011 -
Lele13g1161 2227 MobiDBLite consensus disorder prediction 2206 2227 - -
Lele13g1161 2227 SUPERFAMILY DNA-binding domain 250 303 IPR016177 GO:0003677
Lele13g1161 2227 MobiDBLite consensus disorder prediction 219 238 - -
Lele13g1161 2227 Pfam PHD-finger 73 120 IPR019787 -
Lele13g1161 2227 Pfam PHD-finger 1275 1321 IPR019787 -
Lele13g1161 2227 MobiDBLite consensus disorder prediction 2200 2227 - -
Lele13g1161 2227 SMART PHD_3 72 119 IPR001965 -
Lele13g1161 2227 SMART PHD_3 1275 1321 IPR001965 -
Lele13g1161 2227 MobiDBLite consensus disorder prediction 1495 1515 - -
Lele13g1161 2227 SUPERFAMILY Bromodomain 1110 1229 IPR036427 GO:0005515
Lele13g1161 2227 ProSiteProfiles FYR domain FYRN motif profile. 392 445 IPR003888 GO:0005634
Lele13g1161 2227 Gene3D - 1102 1230 IPR036427 GO:0005515
Lele13g1161 2227 ProSiteProfiles Zinc finger PHD-type profile. 1273 1323 IPR019787 -
Lele13g1161 2227 ProSiteProfiles Bromodomain profile. 1166 1214 IPR001487 GO:0005515
Lele13g1161 2227 PANTHER OS02G0192300 PROTEIN 14 2223 - -
Lele13g1161 2227 MobiDBLite consensus disorder prediction 1996 2051 - -
Lele13g1161 2227 MobiDBLite consensus disorder prediction 2008 2032 - -
Lele13g1161 2227 CDD PHD_SF 72 118 - -
Lele13g1161 2227 Gene3D - 393 501 - -
Lele13g1161 2227 CDD PHD1_Lid2p_like 1275 1320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1161 Lele-ChrLele13 22248064 22259621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1161 2 2227 C2H2 Transcription Factor Family AT3G01460 45.136 0.0 1754
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Lele13g1161 Bromodomain 6.8e-05 No_clan