Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1153 ATGTATTCAGGATATGCTGCACTGTGTTTGATCTTCATCCTTTTTGTAGTTCTTGCGCTGTGTAGAAGAAACAAGACAGGAAACAAGGTTGAAGCACAAAAGGAGGCAACTGATGACAGTACTGCTGACAAACCTAGCCATGTTTCAAATGAATACAAATTAAGCGTGAGCAGACCAGAGTTTTCAGTCACTACTGAAAGTGGGATGGTTTCACAATCACTTGTAGTTCTTTCAAGGCCAAATGTAAATGATATTACATTGGAGGACTTGATGAGGTCCCCTGCTGAACTGATTGGCCGAGGAAAGTTTGGTAGTCTTTATAAAGTGATGTTGGAAAATGGGATGTTGGTGGTTGTTAAGAGGATTAATGACTTGATCATATCAAGCCGTGACTTCAAACAAAGGATGCAAATGCTGAGCCAAGTGAAGCACCTTTCTATACTCTCACCTCTTGCTTTCTATTGTTGCAAACAAGAGAAACTTTTGGTCTATGAATATCAGGAGAATGGAAGTTTGTTCAAGCTTCTACATGGTTCCTCAAGAGACTTTGATTGGATCAGTAGGCTTGGGGTTGAAGCTACAATTGCAGAGGCATTAGCTTTCATGCATCGAGAGCTTGAAGAATGTGGGATCGCACATGGTAACTTGAAATCCTCCAATATTTTGCTAAACAGGAATATGGAGCCCTGCATAAGCGAGTACGGCGCTACGGTTATGGATGATCAAGAACTTAAAAATCAACAGAGTTCATCTTTTGCCAGTTCTTATGCTGCTGGTGCATCAGATGCCTTCAAGGGAGATGTTTATGGCTTTGGAGTGATTCTCCTGGAACTGCTTACTGGGAAGTTAGTGAAGAGCAATGGGATGGACTTGACCGAGTGGGTTGAGTCTGTTGTAAGGGAAGAATGGACGGGTGAAGTGTTTTACAGGTCCCTGATATCAGAGTATGCAAGTGAAGAGAGGTTGGTGAACTTGCTTCAAGTGGCTATAAAATGTATTAATCATTCTCCAGAGGCTAGGCCAAGTATGAACCAAGTTGCTGGCATGATCAACGCCATAAAAGAGGAAGAAGAGAAATCCTTGATTAATGAAGCACAAGGCATTAAGGCTAGTGCTTAA 1119 0.4182 MYSGYAALCLIFILFVVLALCRRNKTGNKVEAQKEATDDSTADKPSHVSNEYKLSVSRPEFSVTTESGMVSQSLVVLSRPNVNDITLEDLMRSPAELIGRGKFGSLYKVMLENGMLVVVKRINDLIISSRDFKQRMQMLSQVKHLSILSPLAFYCCKQEKLLVYEYQENGSLFKLLHGSSRDFDWISRLGVEATIAEALAFMHRELEECGIAHGNLKSSNILLNRNMEPCISEYGATVMDDQELKNQQSSSFASSYAAGASDAFKGDVYGFGVILLELLTGKLVKSNGMDLTEWVESVVREEWTGEVFYRSLISEYASEERLVNLLQVAIKCINHSPEARPSMNQVAGMINAIKEEEEKSLINEAQGIKASA 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1153 372 Pfam Protein tyrosine and serine/threonine kinase 96 347 IPR001245 GO:0004672|GO:0006468
Lele13g1153 372 MobiDBLite consensus disorder prediction 29 46 - -
Lele13g1153 372 ProSitePatterns Protein kinases ATP-binding region signature. 98 120 IPR017441 GO:0005524
Lele13g1153 372 SUPERFAMILY Protein kinase-like (PK-like) 95 349 IPR011009 -
Lele13g1153 372 Gene3D Phosphorylase Kinase; domain 1 62 166 - -
Lele13g1153 372 ProSiteProfiles Protein kinase domain profile. 92 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g1153 372 Gene3D Transferase(Phosphotransferase) domain 1 168 371 - -
Lele13g1153 372 MobiDBLite consensus disorder prediction 29 49 - -
Lele13g1153 372 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 6 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1153 Lele-ChrLele13 22203854 22205054 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1153 87 354 Receptor kinase-like Gene Family AT1G68400 39.502 5.78e-64 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele13g1153 PK_Tyr_Ser-Thr 3.2e-24 CL0016