Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1147 ATGCTTGCGTGTACTTGGATCCGGACAGGTTGTTTGCTGGATCCTTTGGGTTGGATTGGACCGTGTGTAATAAATGCTTGCTTGTACTTGGACTGCTTCAGTAACATCCTGCTCTGTCTTTTAGTAGTATCTGGATTGGACTGGCCTCTGTTGAAGGATGGAGCTATGTGGCTGGCTTTTGTGCAGGCAATGTCGCAAGCCTATGCTATTGAGCTTTACTTCGACCCTGCTCTTGAAAACCAGGTCTTGAAGGCCTGGAATGTACTTGCTCGCCGACAAATCAGTACCCAACTCATGGAACTTGAGTCGCGCCCCCACATCACTCTTTTCTCAGGCCAATTCATCGATCCTATCAAGGTTGAATCAGTTATCAAGAATTTCGCAGCCAAGCTTGAATCTCTGCCTCTATCTTTCTCTTCCATTGGGAGCCTGCCGAATGACAGCAATGTCCTTTTCCTTGCACCCACGCCCTCAATCTCGCTACTTCAGTTTCAATCGCAACTGTGTGATGCATTGAAGAAAGAAGGCGTAGAGATAGGCGAGGAATATCGCCAGGATTCTTGGATTCCTTATTGTTCGGTTGCGCAGGAAGTGCCAAAATCTAGGATGGCCGAGGCATTCTGTGTCTTGCGAGACTTAAAACTGCCAGTCACTGGGTATGCTACGGATATCGAACTGGTGGAGTTCTCACCTGTTCGTGAGCTCTTCTCATATGTGCTGGGCAACACTGTAGAAACATAA 741 0.4764 MLACTWIRTGCLLDPLGWIGPCVINACLYLDCFSNILLCLLVVSGLDWPLLKDGAMWLAFVQAMSQAYAIELYFDPALENQVLKAWNVLARRQISTQLMELESRPHITLFSGQFIDPIKVESVIKNFAAKLESLPLSFSSIGSLPNDSNVLFLAPTPSISLLQFQSQLCDALKKEGVEIGEEYRQDSWIPYCSVAQEVPKSRMAEAFCVLRDLKLPVTGYATDIELVEFSPVRELFSYVLGNTVET 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1147 246 PANTHER - 63 244 - -
Lele13g1147 246 SUPERFAMILY LigT-like 67 228 IPR009097 -
Lele13g1147 246 Pfam 2'-5' RNA ligase superfamily 103 227 - -
Lele13g1147 246 Gene3D Cyclic phosphodiesterase 67 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1147 Lele-ChrLele13 22160496 22163632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1147 64 246 Calmodulin-binding Proteins AT5G40190 72.678 7.27e-90 261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1147 13 22160496 22163632 Lele15g1310 15 7577565 7578116 hybridization
Lele13g1147 13 22160496 22163632 Lele16g1343 16 7640587 7641138 hybridization