Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1142 ATGGCGGGTGGGACGGAAGCCTTCCCGTATTTGGGATCACACTGCCATCACGTTGATTGCCATCAACTCGATTTTCTCCCTTTCACATGCGACGCCTGCTCTCAGGTTTTCTGCTTGGAACATCGATCTTACAGGTCCCACGATTGCCCCAAATCAGACCATAACAGCAGGAAGGTTGTGGTTTGCCCGACATGTTCCATGTCAATTGAGACCACGGGTTATAAGGAAGACGACGAGAAGGCTATATTGGAGAAGCATGACAGATCTGGAATGTGTGACCCCAGCAAGAAGAAAAGGCCCACTTGTCCTGTAAGAAGGTGCAAGGAGGTTTTGACGTTTTCTAATACCTGCACTTGTAAAACTTGCAACCTCAAGGTGTGCCTCAAGCATCGCTTTCCTGCTGATCACGCATGTAAAGGAGTAACCTCGTATTCTTCGTCATCACCTGAGCCTACTGCAAATGGGGGTTGGATGGATCGATTCTTGGCTGCTCTGACTTGGAGGAATGGAGAGCAATGTTCCAAAAGCACCTCATCTCCTCGTAATCCATCTGTTCAAATCTGCTGA 567 0.485 MAGGTEAFPYLGSHCHHVDCHQLDFLPFTCDACSQVFCLEHRSYRSHDCPKSDHNSRKVVVCPTCSMSIETTGYKEDDEKAILEKHDRSGMCDPSKKKRPTCPVRRCKEVLTFSNTCTCKTCNLKVCLKHRFPADHACKGVTSYSSSSPEPTANGGWMDRFLAALTWRNGEQCSKSTSSPRNPSVQIC 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1142 188 SUPERFAMILY AN1-like Zinc finger 94 144 IPR035896 -
Lele13g1142 188 SMART AN1_Zf_4 102 143 IPR000058 GO:0008270
Lele13g1142 188 SMART AN1_Zf_4 15 54 IPR000058 GO:0008270
Lele13g1142 188 Pfam AN1-like Zinc finger 102 140 IPR000058 GO:0008270
Lele13g1142 188 Pfam AN1-like Zinc finger 15 52 IPR000058 GO:0008270
Lele13g1142 188 Gene3D - 78 154 IPR035896 -
Lele13g1142 188 SUPERFAMILY AN1-like Zinc finger 5 57 IPR035896 -
Lele13g1142 188 Gene3D - 2 64 IPR035896 -
Lele13g1142 188 ProSiteProfiles Zinc finger AN1-type profile. 96 146 IPR000058 GO:0008270
Lele13g1142 188 ProSiteProfiles Zinc finger AN1-type profile. 9 57 IPR000058 GO:0008270
Lele13g1142 188 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 7 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1142 Lele-ChrLele13 22136516 22137167 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1142 2 173 C2H2 Transcription Factor Family AT3G28210 60.694 2.05e-74 220