Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1116 ATGTGCATGGAAGGATGTGACTTCCAAGGAACTCGCAGCGTCAAGAGACGAAGAAGAGAGCATGGAGCAGCTGTACTTAACCGGGATGATAATCTGGATCAGAAGAGACAGCAAGTTGATCAAAGTTCTGCAACCCATACCATGAAGAGAAGTTCGAGATTTCAAGGTGTCAGCAGACACAAATGGACTGGTCGGTATGAGGCTCACCCACGGGACACGCTCTCTTGGAATGTAACACAGAAGAAGAAAGGGAAGCAAGTTTACCTTGGTGAGTACGGAATAACCTTCACTATAGAGTCAAGACTGGTGTAA 312 0.4647 MCMEGCDFQGTRSVKRRRREHGAAVLNRDDNLDQKRQQVDQSSATHTMKRSSRFQGVSRHKWTGRYEAHPRDTLSWNVTQKKKGKQVYLGEYGITFTIESRLV 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1116 103 MobiDBLite consensus disorder prediction 37 52 - -
Lele13g1116 103 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 28 92 - -
Lele13g1116 103 MobiDBLite consensus disorder prediction 10 36 - -
Lele13g1116 103 MobiDBLite consensus disorder prediction 1 59 - -
Lele13g1116 103 Pfam AP2 domain 53 93 IPR001471 GO:0003700|GO:0006355
Lele13g1116 103 Gene3D AP2/ERF domain 52 95 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1116 Lele-ChrLele13 21907457 21907880 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1116 12 92 AP2-EREBP Transcription Factor Family AT2G41710 41.975 5.40e-15 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele13g1116 AP2 2.1e-07 CL0081