Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele13g1101 | ATGATGGCCGAAGCTGCAGAGTCTAAACCATTGCCGGAGGCTGAGAAGAAGAAGGAGCAGAGTTTGCCATTTTACCAGCTCTTCTCTTTTGCGGACAAGTATGACTGGCTCCTCATGATCTCTGGGAGCTTAGGAGCAGTTGTTCATGGCTCATCTATGCCCGTTTTCTTTCTTCTTTTCGGTGAGATGGTCAATGGGTTTGGCAAAAACCAGATGGATTTGAAGAAAATGACTGAAGAAGTCTCAAAGTATGCTCTGTATTTTGTGTACCTTGGCCTCGTCGTTTGCATATCATCCTATGCAGAAATTGCGTGCTGGATGTATACCGGGGAGAGACAAGTGAGCACGCTGAGAAAGAAGTACTTGGAGGCGGTGCTTAAACAGGACGTTGGGTTCTTTGACACAGATGCAAGAACAGGGGATATCGTTTTTAGTCTATCCACTGACACTCTGCTCGTTCAAGATGCTATCAGCGAGAAGGTGGGAAACTTCATACATTATCTGTCAACGTTCCTGGCGGGTCTGGTGGTGGGTTTTGTGTCAGCATGGAGGTTAGCTCTGCTAAGTGTTGCAGTGATTCCGGGCATTGCTTTTGCCGGCGGGTTGTATGCTTACACCCTCACAGGCCTCACCTCCAAGAGTCGCGAATCCTATGCGAACGCTGGAATAATCGCTGAGCAGGCAATTGCTCAAGTTCGAACTGTGTACTCGTATGTTGGTGAGAGTAAGGCCTTGAGTTCTTATTCTGATTTGATACAAAACACACTGAAGCTGGGATACAAGGCCGGAATGGCTAAAGGTTTAGGCTTGGGATGTACATATGGGATAGCTTGCATGTCGTGGGCTTTAGTGTTTTGGTATGCTGGAGTTTTCATCAGGAATGGCCAAACTGATGGAGGAAAGGCATTCACTGCTATTTTCTCCGCCATTGTTGGTGGCATGAGTTTGGGGCAGTCATTTTCAAATTTAGGGGCATTTAGTAAAGGTAAAGTAGCTGGATACAAATTAATGGAAATCATTAAGCAGAAACCCACCATAGTGGAAGACCTATCTGAGGGGAAGTGTTTGTCAGAGATTAATGGCAATATTGAACTTAAGGATGTAAGTTTCAGCTATCCATCAAGGCCAGATGTACTCGTCTTCCGCAATTTCTCAATCTTTTTTCCTGCTGCCAAAACTGTTGCCGTTGTTGGGGGTAGTGGGTCGGGGAAAAGCACCGTTGTTTCCTTGATAGAAAGGTTCTACGATCCTAATGAGGGGCAAGTTTTATTGGATAACGTAGACATCAAGACACTACAATTAACATGGTTACGTGATCAAATCGGGCTGGTGAATCAAGAGCCTGCACTATTTGCAACCACCATACTTGAGAATATACTCTATGGAAAACCTGACGCAACCATGGCTGAAGTAGAAGCGGCTGCCTCTGCTGCAAATGCTCATAGCTTTATTACCTTGCTTCCTAATGGGTATAACACTCAGGTGGGAGAGCGAGGGGTGCAGTTATCTGGAGGTCAAAAACAGAGAATTGCCATTGCCAGAGCTATGCTGAAGAACCCCAAGATCCTTCTTTTGGATGAAGCAACTAGTGCTCTTGATGCTGGTTCTGAGAGCATTGTTCAAGAAGCACTAGATCGCCTTATGGTTGGTCGTACAACTGTAGTTGTCGCCCATCGTTTATCCACCATAAGGAATGTTGACAGCATCGCAGTTATACATCAAGGGCAAGTTGTGGAGACAGGAACTCATGAAGAGCTGATCGCCAAGGCAGGGACCTATGCTTCACTAATTCGGTTCCAAGAAATGGTTGGAAACAGAGACTTCTCCAACCCGTCGACTCACCGGACACGTTCATCACGGCTGAGCCATTCGCTTTCAACCAAGTCTTTAAGCCTCCGTTCCGGAAGTTTGAGGAACCTCAGTTACCAATACAGCACAGGGGCGGATGGTCGCATTGAGATGATATCAAATGCTGAAACAGACAAGAAGAATCCTGCTCCTGATGGATACTTCTTCCGCTTACTCAAGTTAAATGCCCCTGAATGGCCTTACTCAATAATGGGAGCTGTAGGATCTGTTCTCTCTGGGTTTATTGGCCCGACTTTTGCCATTGTTATGAGCAATATGATCGAGGTGTTTTACTATAGAAACTATGCATCCATGGAGAGGAAGACTAAGGAGTACGTCTTCATATACATTGGAGCCGGTCTTTACGCGGTTGGTGCATATTTGATACAGCATTACTTCTTCAGCATTATGGGTGAAAATCTCACTACAAGGGTTCGAAGAATGATGCTTGCCGCAATTTTAAGGAATGAAGTAGGATGGTTCGATGAAGAGGAGCACAATTCAAGCCTAGTTGCGGCTCGGCTCGCCACTGATGCTGCAGATGTGAAGTCCGCTATTGCTGAGAGGATCTCAGTGATTCTGCAGAACATGACATCTCTTCTCACTTCTTTCATAGTTGCTTTCATTGTGGAATGGAGAGTTTCCTTGCTCATCCTGGGAACTTTCCCTCTTCTTGTTCTAGCTAATTTTGCTCAGCAACTGTCTCTAAAAGGGTTTGCTGGAGACACAGCCAAGGCTCATGCAAAGACAAGTATGATTGCCGGAGAGGGAGTCAGTAACATCAGGACGGTCGCTGCATTCAATGCCCAAAACAAGATCATATCTTTATTCTGCAACGAGCTTCGTGTCCCACAACGCCGGAGTTTACGCCGGAGCCAAACCTCCGGCCTCCTATTTGGCCTCTCCCAGCTTGCCCTTTATGCCTCCGAAGCTCTCATCCTGTGGTACGGCGCGCATCTTGTAAGCAAAGGCACGTCGACCTTCTCAAAGGTCATAAAAGTTTTCGTGGTCCTAGTCATCACAGCCAATTCCGTCGCAGAAACCGTCAGCCTCGCTCCTGAAATTATCAGAGGCGGTGAAGCCGTTGGTTCTGTCTTCTCCATTCTCGATCGTCAAACTAGGATCGACCCAGACGATCTCGATGCTGACCCAGTTGAGTCTATTCGCGGGGAGATTGAACTAAGACATGTGGATTTTGCCTACCCATCACGACCTGACGTGATGGTGTTTAAAGATCTTAATATTAGAATCCGTGCAGGGCAGAGCCAGGCTCTCGTGGGAGCAAGTGGCTCAGGCAAGAGTTCTGTCATTGCATTGATCGAGCGTTTCTATGACCCCATAGCCGGAAAAGTCATGATTGATGGAAAAGACATTAAACGATTGAACTTGAAGTCCTTAAGACTAAAGATTGGATTAGTGCAACAGGAGCCTGCTCTATTCGCAGCAAGCATTCTCGACAACATAGCTTATGGCAAAGATGGAGCAACAGAAGCAGAAGTAATCGAAGCTGCTCGCGCTGCCAATGTTCATTCATTTGTTAGTAGTTTGCCTGAGGGATACAAGACCCCAGTTGGTGAGAGAGGAGTTCAATTATCTGGTGGTCAAAAACAGAGGATAGCCATTGCGAGAGCAGTCCTTAAGGACCCTACAATACTTCTGTTAGACGAGGCGACGAGTGCACTTGATGCAGAATCAGAGTGTGTCCTACAAGAAGCCCTAGAGAGGCTGATGAGGGGGCGAACCACGGTGCTTGTGGCTCATCGCTTATCGACCATTAGAGGGGTTGACAGTATCGGAGTGGTGCAAGATGGGCGAATTGTGGAGCAGGGAAGCCATGGGGAACTTGTGAGCAGACCAGAGGGTGCATATTCGAGACTCTTGCAGCTACAAAGTCATCATATGTGA | 3753 | 0.4682 | MMAEAAESKPLPEAEKKKEQSLPFYQLFSFADKYDWLLMISGSLGAVVHGSSMPVFFLLFGEMVNGFGKNQMDLKKMTEEVSKYALYFVYLGLVVCISSYAEIACWMYTGERQVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSLSTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFVSAWRLALLSVAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALSSYSDLIQNTLKLGYKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGQTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKVAGYKLMEIIKQKPTIVEDLSEGKCLSEINGNIELKDVSFSYPSRPDVLVFRNFSIFFPAAKTVAVVGGSGSGKSTVVSLIERFYDPNEGQVLLDNVDIKTLQLTWLRDQIGLVNQEPALFATTILENILYGKPDATMAEVEAAASAANAHSFITLLPNGYNTQVGERGVQLSGGQKQRIAIARAMLKNPKILLLDEATSALDAGSESIVQEALDRLMVGRTTVVVAHRLSTIRNVDSIAVIHQGQVVETGTHEELIAKAGTYASLIRFQEMVGNRDFSNPSTHRTRSSRLSHSLSTKSLSLRSGSLRNLSYQYSTGADGRIEMISNAETDKKNPAPDGYFFRLLKLNAPEWPYSIMGAVGSVLSGFIGPTFAIVMSNMIEVFYYRNYASMERKTKEYVFIYIGAGLYAVGAYLIQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSSLVAARLATDAADVKSAIAERISVILQNMTSLLTSFIVAFIVEWRVSLLILGTFPLLVLANFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTVAAFNAQNKIISLFCNELRVPQRRSLRRSQTSGLLFGLSQLALYASEALILWYGAHLVSKGTSTFSKVIKVFVVLVITANSVAETVSLAPEIIRGGEAVGSVFSILDRQTRIDPDDLDADPVESIRGEIELRHVDFAYPSRPDVMVFKDLNIRIRAGQSQALVGASGSGKSSVIALIERFYDPIAGKVMIDGKDIKRLNLKSLRLKIGLVQQEPALFAASILDNIAYGKDGATEAEVIEAARAANVHSFVSSLPEGYKTPVGERGVQLSGGQKQRIAIARAVLKDPTILLLDEATSALDAESECVLQEALERLMRGRTTVLVAHRLSTIRGVDSIGVVQDGRIVEQGSHGELVSRPEGAYSRLLQLQSHHM | 1250 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele13g1101 | 1250 | CDD | ABC_MTABC3_MDL1_MDL2 | 1008 | 1246 | - | - | |
Lele13g1101 | 1250 | CDD | ABC_6TM_Pgp_ABCB1_D2_like | 675 | 991 | - | - | |
Lele13g1101 | 1250 | FunFam | ABC transporter B family member 1 | 26 | 361 | - | - | |
Lele13g1101 | 1250 | Gene3D | ABC transporter type 1, transmembrane domain | 975 | 997 | IPR036640 | GO:0005524|GO:0016020 | |
Lele13g1101 | 1250 | FunFam | ABC transporter B family member 19 | 353 | 601 | - | - | |
Lele13g1101 | 1250 | Pfam | ABC transporter transmembrane region | 686 | 957 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Lele13g1101 | 1250 | Pfam | ABC transporter transmembrane region | 44 | 313 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Lele13g1101 | 1250 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1010 | 1244 | IPR003439 | GO:0005524 | |
Lele13g1101 | 1250 | SUPERFAMILY | ABC transporter transmembrane region | 27 | 348 | IPR036640 | GO:0005524|GO:0016020 | |
Lele13g1101 | 1250 | FunFam | ABC transporter B family member 1 | 665 | 974 | - | - | |
Lele13g1101 | 1250 | ProSitePatterns | ABC transporters family signature. | 502 | 516 | IPR017871 | GO:0005524|GO:0016887 | |
Lele13g1101 | 1250 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 363 | 599 | IPR003439 | GO:0005524 | |
Lele13g1101 | 1250 | Pfam | ABC transporter | 1027 | 1175 | IPR003439 | GO:0005524 | |
Lele13g1101 | 1250 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 42 | 328 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Lele13g1101 | 1250 | CDD | ABC_MTABC3_MDL1_MDL2 | 363 | 600 | - | - | |
Lele13g1101 | 1250 | PANTHER | ABC TRANSPORTER B FAMILY | 4 | 698 | - | - | |
Lele13g1101 | 1250 | Gene3D | ABC transporter type 1, transmembrane domain | 26 | 974 | IPR036640 | GO:0005524|GO:0016020 | |
Lele13g1101 | 1250 | Gene3D | - | 998 | 1247 | IPR027417 | - | |
Lele13g1101 | 1250 | Gene3D | - | 353 | 601 | IPR027417 | - | |
Lele13g1101 | 1250 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 686 | 973 | IPR011527 | GO:0005524|GO:0016020|GO:0055085|GO:0140359 | |
Lele13g1101 | 1250 | Pfam | ABC transporter | 382 | 530 | IPR003439 | GO:0005524 | |
Lele13g1101 | 1250 | CDD | ABC_6TM_Pgp_ABCB1_D1_like | 39 | 336 | - | - | |
Lele13g1101 | 1250 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 356 | 600 | IPR027417 | - | |
Lele13g1101 | 1250 | ProSitePatterns | ABC transporters family signature. | 1147 | 1161 | IPR017871 | GO:0005524|GO:0016887 | |
Lele13g1101 | 1250 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1001 | 1246 | IPR027417 | - | |
Lele13g1101 | 1250 | SUPERFAMILY | ABC transporter transmembrane region | 667 | 988 | IPR036640 | GO:0005524|GO:0016020 | |
Lele13g1101 | 1250 | SMART | AAA_5 | 1035 | 1221 | IPR003593 | - | |
Lele13g1101 | 1250 | SMART | AAA_5 | 390 | 562 | IPR003593 | - | |
Lele13g1101 | 1250 | FunFam | ABC transporter B family member 19 | 998 | 1247 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele13g1101 | Lele-ChrLele13 | 21813929 | 21819774 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele13g1101 | 13 | 1246 | Calmodulin-binding Proteins | AT2G36910 | 53.551 | 0.0 | 1344 |