Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1094 ATGCATGGACATGCAAACAAAAGAATCACGGTGATTTTGTCGTACAGGGCTGGAACAGAGGGAAGTGGCCAGATGAGGAAACGTCAAGTTGTGGTGAGAAGGGAGGAGCCTGCTCGGTGCTCAAGCTCTTCTTCTTTTACTGTTAGGAGTGTGAAATATGGAGAGTGCCAAAAGAATCATGCGGCTAACGTCGGAGGATACGCCGTGGACGGTTGCCGCGAATTCATGGCGAGTGGAGATGAAGGCACAGCCGCTGCTCTGACCTGTGCCGCCTGTGGTTGCCACAGGAACTTTCACAAAAGAGAGGTGGAGACTGAAGTAGTGTGTGATGAGTGCTCTTCACCTACCTCCAACGGGACTTGA 363 0.5179 MHGHANKRITVILSYRAGTEGSGQMRKRQVVVRREEPARCSSSSSFTVRSVKYGECQKNHAANVGGYAVDGCREFMASGDEGTAAALTCAACGCHRNFHKREVETEVVCDECSSPTSNGT 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1094 120 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 52 103 IPR006456 -
Lele13g1094 120 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 26 106 - -
Lele13g1094 120 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 53 102 IPR006456 -
Lele13g1094 120 Pfam ZF-HD protein dimerisation region 51 103 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1094 Lele-ChrLele13 21760056 21761208 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1094 25 119 Zinc finger-homeobox gene family AT3G28917 74.000 1.28e-42 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Lele13g1094 ZF-HD_dimer 3.7e-30 No_clan