Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1075 ATGGGTCGGTCACCATGCTGCGACAAGGTGGGCTTAAAGAAAGGGCCATGGACTCCTGAGGAAGATCAGAAACTTTTAGCTTATATCGAAGAACACGGCCATGGCAGCTGGCGTGCCTTGCCAGCAAAAGCGGGACTTCAGAGGTGTGGCAAGAGCTGCAGACTGAGATGGACCAATTATCTTAGGCCTGATATAAAGAGAGGAAAGTTCAGCTTGCAAGAAGAGCAAACTATCATTCAACTCCATGCCCTCTTAGGGAACAGGTGGTCGGCTATAGCAACACACTTGCCAAAGAGAACAGATAATGAGATCAAGAACTACTGGAACACGCATCTTAAGAAACGATTAGCCAAAATGGGTATTGACCCGATGACCCACAAGCCCAAGAACGATACCCTTCTCTCCATCAACGGCCAATCCAAGAGTGCTGCCAACCTTAGTCACATGGCTCAATGGGAGAGTGCAAGGCTTGAAGCTGAAGCAAGGTTGGTTAGAGAATCAAAACTACGTTTACATTCATTGCAGCAGCAGCAGCTTTGCAGTTCTGGGTTTTCATCTTCATCTTCTGCTTCAACTTCATCAGCCCCAGTTGCTAATGAGGATAAACCAGAGGGACCACCACCTATTTCCTCACGCTCTCTAGATGTGCTTAAGGCATGGAATAATGGAGGTTGTTGGTTGAAATCTACTCATGAAGGCCATCATCATAATGGTGGCGGCGGCGACCTTGAATCCCCTTCGTCTTCCCTGACTTTCTCCGAGAACGCTCCGCCACCACTTATGACCAGTGGACTTGGAGAAACTACAATGCACATGATTGAGTTCGTGGGCTCGTCCGGTTCTTCCAAGACAGGAATTGTGAAAGAAGAAGGCGAGCAAGAATGGAAAGGTTATGGAAGTTCAGTGCATCTTCCAGAATACAAAGATGGTTTAGATCATAACTCCATGTCTTTTGCGTCAAGCCTGCATGAGTTGACAATGTCCATGGAAGGCACGTGGACGTCTGAGTCTCTTAGGACTAGTACTGATGCTATTGTTGAGGACGGATTCACCAATCTTTTGCTTAACACTAACTCTGACGACCGGAGTTTGTCGGAGGAAGGTGGAGGAGAGTCTAATAACTGTGACGGTAATAATGGAGGCAGCACTGGAAGTGACCTCTATGAAGATAACAAGAACTACTGGAACAGCATTCTTAATTTAGTCAACTCTTCCCCTTCTGACTCTCCCATGTTCTGA 1239 0.4689 MGRSPCCDKVGLKKGPWTPEEDQKLLAYIEEHGHGSWRALPAKAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLAKMGIDPMTHKPKNDTLLSINGQSKSAANLSHMAQWESARLEAEARLVRESKLRLHSLQQQQLCSSGFSSSSSASTSSAPVANEDKPEGPPPISSRSLDVLKAWNNGGCWLKSTHEGHHHNGGGGDLESPSSSLTFSENAPPPLMTSGLGETTMHMIEFVGSSGSSKTGIVKEEGEQEWKGYGSSVHLPEYKDGLDHNSMSFASSLHELTMSMEGTWTSESLRTSTDAIVEDGFTNLLLNTNSDDRSLSEEGGGESNNCDGNNGGSTGSDLYEDNKNYWNSILNLVNSSPSDSPMF 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1075 412 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele13g1075 412 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Lele13g1075 412 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 194 - -
Lele13g1075 412 FunFam MYB-related transcription factor 13 66 - -
Lele13g1075 412 FunFam MYB transcription factor 69 116 - -
Lele13g1075 412 MobiDBLite consensus disorder prediction 357 387 - -
Lele13g1075 412 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele13g1075 412 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele13g1075 412 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele13g1075 412 Gene3D - 68 141 - -
Lele13g1075 412 MobiDBLite consensus disorder prediction 182 198 - -
Lele13g1075 412 SMART sant 66 114 IPR001005 -
Lele13g1075 412 SMART sant 13 63 IPR001005 -
Lele13g1075 412 MobiDBLite consensus disorder prediction 242 258 - -
Lele13g1075 412 MobiDBLite consensus disorder prediction 231 265 - -
Lele13g1075 412 MobiDBLite consensus disorder prediction 182 213 - -
Lele13g1075 412 Gene3D - 13 66 - -
Lele13g1075 412 CDD SANT 16 61 IPR001005 -
Lele13g1075 412 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele13g1075 412 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Lele13g1075 412 CDD SANT 69 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1075 Lele-ChrLele13 21623198 21625178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1075 1 412 MYB Transcription Factor Family AT3G01140 52.358 7.06e-124 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele13g1075 Myb_DNA-binding 1.5e-15 CL0123