Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1072 ATGGCATCACAGAATGAAGATCTCATGGAGAAATCCTCGGGACTCAGAACTGGCAGGTGGTGCGACGAAGAAGACGTTCTTCTCAGGGCCTGTGTTCTCAGAAAAAGCTGCAGGTTGAGGTGGTTAAACTATCTGAAACCTGATATCAAGAGGGGAGACTTCTCTGAGGATGAAATTGATATGATGATCAGACTTCACAGACTCTTGGGAAACAGGCACGTATGGTCACTGATAGCTGGAAGGCTTCCTGGAAGAACAGCAGATGGTGTGAAAAACTACTGGAACACCCACATGCGTGAGAGGGGACGACATTGTCATGGTTCATGTCAGTCGGCAGAAAAATCAGAGGAAACAAGCATGAGAAGCCATACACCAATAACAGTAATAAAACCTCAAGCTTTCAGGTTTTCATCAAGAAGCTCGTCGTCGTCTTGGTGGAGAGAGAATATTGCAGGTGGCGATGAAGTAGTTATTAGCGAAGAGAATAGTAGAAGCAGAAGAGGCCCAGATGAAGGGCAAAACCAACAGGAGGGAGATGACAAGTCAATGGAGTGGTGGAAATGCTTTGATGACAATGATACAATTGGCTCGTCGTCATCAAAATCATCGTCTATGTCGATGACGGAGCAAGAAGGCACGTTTCATCAATTATGGGATCAGCAACTTTCTTGGACTGATGGTGACTTTCCTTTTTTACACACATCTCTCTCCGATTTTCTCGCTTAA 726 0.4504 MASQNEDLMEKSSGLRTGRWCDEEDVLLRACVLRKSCRLRWLNYLKPDIKRGDFSEDEIDMMIRLHRLLGNRHVWSLIAGRLPGRTADGVKNYWNTHMRERGRHCHGSCQSAEKSEETSMRSHTPITVIKPQAFRFSSRSSSSSWWRENIAGGDEVVISEENSRSRRGPDEGQNQQEGDDKSMEWWKCFDDNDTIGSSSSKSSSMSMTEQEGTFHQLWDQQLSWTDGDFPFLHTSLSDFLA 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1072 241 CDD SANT 54 98 IPR001005 -
Lele13g1072 241 MobiDBLite consensus disorder prediction 156 183 - -
Lele13g1072 241 MobiDBLite consensus disorder prediction 159 183 - -
Lele13g1072 241 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 46 102 IPR017930 -
Lele13g1072 241 Pfam Myb-like DNA-binding domain 51 97 IPR001005 -
Lele13g1072 241 SMART sant 50 100 IPR001005 -
Lele13g1072 241 SUPERFAMILY Homeodomain-like 34 106 IPR009057 -
Lele13g1072 241 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 34 197 - -
Lele13g1072 241 ProSiteProfiles Myb-like domain profile. 46 98 IPR001005 -
Lele13g1072 241 Gene3D - 53 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1072 Lele-ChrLele13 21589048 21590447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1072 10 218 MYB Transcription Factor Family AT1G66370 36.364 1.49e-39 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele13g1072 Myb_DNA-binding 5.9e-09 CL0123