Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1066 ATGGCAGCTTGTGTAATCACGGTTTCACAGACCGGAAGCGGAGAGTATCGGACGGTGCAGGAAGCAATTGATTCCATTCCCTTGGGAAACAACCGTCGGACGGTGATTCGAGTGTCTCCGGGAATCTACAAGCAGCCAGTGTACGTACCCAAGACTAAGAATTTTATCACCCTTGCCGGTCTGTGTCCGGAGGACACTGTGCTTACCTGGAATAATACCGCTTCCAGAATCGAACACCACCAGGCTGCTCGGGTAATAGGCACTGGTACTTTTGGCTGTGGTAGTATCATTGTGGAGGGAGAGGATTTTATTGCCGAGAACATGACGTTCGAGAATTCCTCTCCTCAGGGTTCAGGGCAAGCGGTGGCAATTAGAGTGACAGCAGATCGATGTGCCTTCTATAACTGCAGGTTCCTGGGATGGCAGGACACTCTGTACTTACACTATGGCAAACAGTACTTGAAGGATTGTTATATTGAAGGAAGCGTGGACTTTATTTTTGGCAATAGCACTGCTCTTTTGGAACATTGCCATATTCACTGCAAGTCTGAAGGTTTCATTACTGCACAGAGTAGAAAATCTTCTCATGAAACAACTGGTTATGTATTCCTAAGATGTGTCATAACGGGTAATGGAGATACTTCATACGCATATCTTGGACGACCATGGGGACCTTTTGGAAGAGTGATCTTTGCATACACTTATATGGATCGATGTATAAGGCCTCATGGCTGGAATAATTGGGGTAAAGTCGAGAATGAGAGAACTTGTTGCTTTTATGAATACAGGTGTCATGGACATGGTTGCTGTCCATCCAAACGAGTGGCATGGGCGAGAGAATTGATAGATGAAGAAGCAGAGCAGTTCCTTTCACATCGTTTCATTGACCCAGATGCTAATAGACCTTGGCTTGCCCAAAGAATGGCTTTGAGGATTCCATATTCTGCTTAG 951 0.4574 MAACVITVSQTGSGEYRTVQEAIDSIPLGNNRRTVIRVSPGIYKQPVYVPKTKNFITLAGLCPEDTVLTWNNTASRIEHHQAARVIGTGTFGCGSIIVEGEDFIAENMTFENSSPQGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCKSEGFITAQSRKSSHETTGYVFLRCVITGNGDTSYAYLGRPWGPFGRVIFAYTYMDRCIRPHGWNNWGKVENERTCCFYEYRCHGHGCCPSKRVAWARELIDEEAEQFLSHRFIDPDANRPWLAQRMALRIPYSA 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1066 316 FunFam Pectinesterase 2 309 - -
Lele13g1066 316 Pfam Pectinesterase 6 296 IPR000070 GO:0030599|GO:0042545
Lele13g1066 316 ProSitePatterns Pectinesterase signature 2. 159 168 IPR033131 -
Lele13g1066 316 Gene3D - 2 310 IPR012334 -
Lele13g1066 316 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 5 303 - -
Lele13g1066 316 SUPERFAMILY Pectin lyase-like 2 303 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1066 Lele-ChrLele13 21562522 21565554 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1066 5 309 Carbohydrate Esterase AT5G47500 38.730 3.59e-70 220