Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1060 ATGCGAGCGAACTGCGAAAGCATCGAAGGAGAACATAAAGGGTCTATTATTATTCGCCATATTCCTGAATTCTTGATGATTAGTTTTCTTCTCTCTGTCTACGGTTTAATCGGCGATCTGAAAATGGATGGGTCAACTGGTCGTGGTGGTACTGGTGTGGACATGTATCTACCAAATTATAAATTGGGGAAAACACTTGGTATTGGATCCTTTGGCAAGGTGAAAATTGCTGAGCATGTTTTGACAGGTCACAAAGTTGCCATTAAGATCCTCAACAAACGTAAGATAAAGAATATGGAAATGGAAGAAAAAGTGAGAAGAGAAATCAAAATTTTAAGATTGTTCATGCATCCTCACATCATACGACTTTATGAAGTCATAGAAACCGCAGCAGACATATATGTTGTAATGGAGTATGTAAAATCTGGAGAGCTCTTTGACTACATAGTAGAAAAGGGTAGGTTGCAAGAAGATGAAGCTCGTAATTTTTTTCAGCAGATAATCTCTGGTGTGGAGTACTGTCACAGGAATATGGTGGCTCATAGAGATTTGAAGCCTGAGAATTTGCTGTTGGACTCCAAATGCAATGTTAAGATTGCAGATTTTGGTCTGAGCAACGTCATGGTTGATGGTCATTTCCTTAAGACAAGTTGTGGGAGCCCAAACTATGCTGCTCCTGAGGTAATCTCTGGAAAATATTATGCTGGGCCTGAAGTAGATGTATGGAGTTGTGGTGTAATTTTATACGCTCTTCTCTGTGGTACTCTTCCTTTTGATGATGAAAACATTCCAAACCTTTTCAAGAAAATAAAGGGTGGGATATACACTCTTCCTAGTCATCTGTCACCTGGTGCTAGAGATCTGATCCCGAGGATGCTTGTGGTTGATCCTATGAAAAGGGTGACCATACCTGAGATCCGTCAACACCCATGGTTCCAAGCTCATCTCCCTCGATATTTGGCGGTGCCACCACCCGATACTTCACAACAAGCCAAAAAGATTGATGAGGAAATTCTTCAGGAAGTGGTTAATATGGGATTTGATAGGAATCAGTTGGTTGAATCTCTTCGCAACAGGATACAGAATGAGGGTACTGTGGCATATTATTTGCTACTGGACAATCGATTCCGTGTTTCGAGCGGCTATCTTGGTGATGAGTTTCAAGAGAGTATGGATACTGGTTATAATCGTATCCATCCTAGTGATGTCGCTGCTCCAGCTGTTGGGAGCCGCTTTCCAGGGTATATGGATTATCAAGGAGTTGGATTGAGGCCACAGTTCCCTGCTGAGAGAAAATGGGCCCTTGGGCTCCAGTCTCAAGCCCATCCTCGTGAAATAATGACCGAGGTCCTTAAAGCTCTGCAACAATTGAATGTGTGTTGGAAGAAGATTGGACACTATAACATGAAGTGCCGGTGGGTTGCTGGCATTCTGGGTCATCCTGAAGGAATGGGGAACAACCATAATCATTACTTTGGAGATGATTCTGCTATTATTGAGAATGATGCTGTTTCTAAGTCAAATGTAGTCAAGTTTGAAATGCAGCTTTACAAAACCCGTGAAGAGAAGTATCTGCTTGATCTTCAAAGGGTCCAGGGTCCCCAGTTTCTCTTCTTGGATCTTTGTGCCTCTTTCCTTGCGCAGCTACGTGTCCTCTAG 1659 0.4244 MRANCESIEGEHKGSIIIRHIPEFLMISFLLSVYGLIGDLKMDGSTGRGGTGVDMYLPNYKLGKTLGIGSFGKVKIAEHVLTGHKVAIKILNKRKIKNMEMEEKVRREIKILRLFMHPHIIRLYEVIETAADIYVVMEYVKSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVAHRDLKPENLLLDSKCNVKIADFGLSNVMVDGHFLKTSCGSPNYAAPEVISGKYYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLVVDPMKRVTIPEIRQHPWFQAHLPRYLAVPPPDTSQQAKKIDEEILQEVVNMGFDRNQLVESLRNRIQNEGTVAYYLLLDNRFRVSSGYLGDEFQESMDTGYNRIHPSDVAAPAVGSRFPGYMDYQGVGLRPQFPAERKWALGLQSQAHPREIMTEVLKALQQLNVCWKKIGHYNMKCRWVAGILGHPEGMGNNHNHYFGDDSAIIENDAVSKSNVVKFEMQLYKTREEKYLLDLQRVQGPQFLFLDLCASFLAQLRVL 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1060 552 CDD AMPKA_C 430 549 - -
Lele13g1060 552 ProSitePatterns Protein kinases ATP-binding region signature. 66 89 IPR017441 GO:0005524
Lele13g1060 552 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 333 373 IPR015940 -
Lele13g1060 552 SUPERFAMILY UBA-like 322 371 IPR009060 GO:0005515
Lele13g1060 552 PANTHER SERINE/THREONINE KINASE 59 377 - -
Lele13g1060 552 SMART uba_6 335 372 IPR015940 -
Lele13g1060 552 Gene3D Transferase(Phosphotransferase) domain 1 52 390 - -
Lele13g1060 552 FunFam Non-specific serine/threonine protein kinase 50 141 - -
Lele13g1060 552 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Lele13g1060 552 Pfam Kinase associated domain 1 509 551 IPR001772 -
Lele13g1060 552 SMART serkin_6 60 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g1060 552 Pfam Protein kinase domain 60 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g1060 552 CDD STKc_AMPK_alpha 57 312 - -
Lele13g1060 552 Gene3D Kinase associated domain 1, KA1 436 550 - -
Lele13g1060 552 SUPERFAMILY Protein kinase-like (PK-like) 57 327 IPR011009 -
Lele13g1060 552 CDD UBA_SnRK1_plant 334 374 - -
Lele13g1060 552 FunFam Non-specific serine/threonine protein kinase 436 550 - -
Lele13g1060 552 Pfam UBA/TS-N domain 334 370 IPR015940 -
Lele13g1060 552 ProSiteProfiles Protein kinase domain profile. 60 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g1060 552 ProSiteProfiles Kinase associated domain 1 (KA1) profile. 503 551 IPR001772 -
Lele13g1060 552 SUPERFAMILY KA1-like 369 551 IPR028375 -
Lele13g1060 552 FunFam Non-specific serine/threonine protein kinase 51 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1060 Lele-ChrLele13 21545114 21550595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1060 60 312 CBL-interacting serine-threonine protein kinases AT4G24400 51.969 1.05e-91 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Lele13g1060 Pkinase 1.7e-80 CL0016