Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1058 ATGAAACGCAGTTCGAAAGCGGTGAGTCGTGGGGGTCAGACGAAGGAGAAGCACGACCCCGCCACCATTTCTAGTTGCCAAATCCGGAAATCCAACGACGGTTGTTATCAACTAATGGCCGCAAAGAACGGCGGATCCGCCACTGCGCCACCGCCACGCCCGACGATCACTCTACCACCTCGGCCTTCCATGGAGGTCTTCTTCTCCGGTGGGCCAGGCGCAAGCCCCGGCCCGATGACCCTCGTATCCAGCTTCTTCTCCGATAATTACCCGGACTCAGACTGTCGGTCCTTTTCTCAGTTGCTCGCCGGAGCCATGGCTTCTCCGCTTGCTCTCAGTGCGAGGCCTGGCTTCTTTCCGGAAAATTCGACCGACAATTCCTCCAAAGAAGCTACTGCTGAGGATGGGGCCCAGAAGAATTCAGGTTTCAAGCAGAGTAGACCCATGAATCTGGTTATTGCTCGTTCACCAATGTTTACAGTTCCACCTGGATTAAGCCCTTCTGGGTTGCTTAATTCACCGGGCTTCTTTCCGCCACAGAGTCCCTTTGGGATGTCCCATCAGCAGGCTTTGGCTCAGGTTCAAGCTCAAGCTGTCCTGGCACAATCACATATGCACATGCAAGGTGATCATCAACAATCTGCTGTAACAGCTCCTGGTGAACCATTGGTGCAGCAGCCATCTTTTGTTCCAAGTGAAGCTTCAGACCAGCAAATGGCACCATCTGCATCAGATTCTAGAAGTGCTCAAATGGAGACCTCAGATATTTCTCACACTGATAAGAAATATCAACCTTCTTCCTTAGCCATTGATAAACCTGCAGATGATGGCTACAATTGGCGTAAGTATGGGCAGAAGCAGGTTAAAGGGAGTGAGTACCCACGGAGCTACTACAAGTGTACACATCTGAATTGCCCAGTAAAGAAAAAGGTTGAGCGTGCTCCTGATGGCCACATAACTGAAATTATCTATAAAGGCCAGCATAATCATGAACTGCCTCAGCCAAACAAGCGTATCAAAGATAATTCTGATTTAAATGGAAATACAAGTGTTCAAGTTCAGTCTGACTCGACTACACAACTCTGGGTGGGAAATTTAACCAAGTTCGGTGAAAGCATGCCTGATCATTCAGTGCCAGAAAGTGATCCCTCATCCAATCAAGGTGCTCACAGGCAACCGCTTGGATCAAGTGAGAGTGAGGAAGGGGGTGATGCTGATACAAAGGAAGAGGAGGGAGATGTCAGTGAGCCAAATCCGAAGAGAAGGAACACTGATCTTGTGGCTTCTGAAGTACCTATGTCTCACAAGACTGTCACAGAACCCAAAATCATTGTGCAAACAAGAAGCGAAGTTGATCTTCTGGATGATGGCTACAGGTGGCGCAAGTATGGGCAAAAAGTGGTAAAAGGAAATCCCTATCCAAGGAGTTATTACAAATGCACCAGTGCAGGATGCAATGTGCGTAAACATGTTGAGAGGGCTTCAACAGACCCCAAAGCTGTCATAACTACCTATGAGGGAAAACATAACCATGATGTTCCTGCAGCTAAAACCAGCAGCCACAACGCAGCTAATAGCAATTCAATGCCAGTAAAACCACAGAGAGTGGTGCCTGAGAAGCATCCTCTGCTTAGAGATATGGATTTTGGAAATAACGACCAAAGACCGGTCGCATTACGCTTGAAAGAAGAGCAAATCATAGTATAG 1707 0.4815 MKRSSKAVSRGGQTKEKHDPATISSCQIRKSNDGCYQLMAAKNGGSATAPPPRPTITLPPRPSMEVFFSGGPGASPGPMTLVSSFFSDNYPDSDCRSFSQLLAGAMASPLALSARPGFFPENSTDNSSKEATAEDGAQKNSGFKQSRPMNLVIARSPMFTVPPGLSPSGLLNSPGFFPPQSPFGMSHQQALAQVQAQAVLAQSHMHMQGDHQQSAVTAPGEPLVQQPSFVPSEASDQQMAPSASDSRSAQMETSDISHTDKKYQPSSLAIDKPADDGYNWRKYGQKQVKGSEYPRSYYKCTHLNCPVKKKVERAPDGHITEIIYKGQHNHELPQPNKRIKDNSDLNGNTSVQVQSDSTTQLWVGNLTKFGESMPDHSVPESDPSSNQGAHRQPLGSSESEEGGDADTKEEEGDVSEPNPKRRNTDLVASEVPMSHKTVTEPKIIVQTRSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTSAGCNVRKHVERASTDPKAVITTYEGKHNHDVPAAKTSSHNAANSNSMPVKPQRVVPEKHPLLRDMDFGNNDQRPVALRLKEEQIIV 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1058 568 MobiDBLite consensus disorder prediction 511 535 - -
Lele13g1058 568 FunFam WRKY transcription factor 262 334 - -
Lele13g1058 568 MobiDBLite consensus disorder prediction 339 366 - -
Lele13g1058 568 MobiDBLite consensus disorder prediction 325 434 - -
Lele13g1058 568 ProSiteProfiles WRKY domain profile. 269 333 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele13g1058 568 FunFam WRKY transcription factor 33 441 507 - -
Lele13g1058 568 MobiDBLite consensus disorder prediction 41 63 - -
Lele13g1058 568 ProSiteProfiles WRKY domain profile. 449 514 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele13g1058 568 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 173 528 IPR044810 GO:0003700
Lele13g1058 568 SUPERFAMILY WRKY DNA-binding domain 273 333 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele13g1058 568 MobiDBLite consensus disorder prediction 378 394 - -
Lele13g1058 568 SMART WRKY_cls 274 332 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele13g1058 568 SMART WRKY_cls 454 513 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele13g1058 568 MobiDBLite consensus disorder prediction 117 146 - -
Lele13g1058 568 MobiDBLite consensus disorder prediction 516 532 - -
Lele13g1058 568 MobiDBLite consensus disorder prediction 202 279 - -
Lele13g1058 568 MobiDBLite consensus disorder prediction 119 146 - -
Lele13g1058 568 Pfam WRKY DNA -binding domain 455 511 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele13g1058 568 Pfam WRKY DNA -binding domain 275 331 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele13g1058 568 Gene3D WRKY domain 439 515 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele13g1058 568 Gene3D WRKY domain 263 334 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele13g1058 568 SUPERFAMILY WRKY DNA-binding domain 446 514 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele13g1058 568 MobiDBLite consensus disorder prediction 202 221 - -
Lele13g1058 568 MobiDBLite consensus disorder prediction 228 253 - -
Lele13g1058 568 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1058 Lele-ChrLele13 21529586 21534686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1058 53 566 WRKY Transcription Factor Family AT2G03340 54.511 2.44e-157 458
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele13g1058 WRKY 1.4e-25 CL0274