Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1056 ATGGATCACATCTCAACCGCAAGATCACATCAAGGTGTTTCTAGGCGGACAAGGGATAAACAGCCAGTGGCAGTTGCAGATCTAAAACGCAATCCACCTCAATTTTTAAACTACAAAATGAACTTCAACAGTGTTTATATAGACAGGATATTCTGGGGACTGCTTCTTTCTCCTAGAGAGGGTACCTGGAAGGCGCTGAAGAGTGAAGAATCAATGGCGAATCTGAAGAAGTATTTTGGGTTGCTTCTTGTGGTGTGCACTGGGCTTGTGATGTTGCCGGAGGCGTCGGCGACGAGGTGGATTGTCGGAGGCAAAATGGGCTGGAGCCCCAATGTGAACTACACTATTTGGGCTCGGGACAAGCACTTCTACAATGGCGACTGGCTCTTTTTTGTATATGATAGGAACCAGCAGAGCGTACTTGAGGTGAACAAGACAAACTACGAGACATGCAACACAGACCATCCACTTCACAACTACACTACAGGGGCTGGAAGAGACGTGGCTCCTCTGAATGTAACTCGCGATTACTACTTTGTGAGTGGAAATGGATTCTGCTATGGGGGAATGAAGGTTCACATTCACGTGCAAAACCCACCCCCACCACCTGTAGCTTCTCCTGAAAAAGCTGCTTCTTCCACTCTATCTTCATCAGGTCTTGTTCTTCTGTTGCCTGTAGCGTTTGCCATTGGATCGGCTTGGGATGCTTTGTTTCGTTTCTGGTGA 726 0.4738 MDHISTARSHQGVSRRTRDKQPVAVADLKRNPPQFLNYKMNFNSVYIDRIFWGLLLSPREGTWKALKSEESMANLKKYFGLLLVVCTGLVMLPEASATRWIVGGKMGWSPNVNYTIWARDKHFYNGDWLFFVYDRNQQSVLEVNKTNYETCNTDHPLHNYTTGAGRDVAPLNVTRDYYFVSGNGFCYGGMKVHIHVQNPPPPPVASPEKAASSTLSSSGLVLLLPVAFAIGSAWDALFRFW 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1056 241 MobiDBLite consensus disorder prediction 1 23 - -
Lele13g1056 241 Pfam Plastocyanin-like domain 108 190 IPR003245 GO:0009055
Lele13g1056 241 PANTHER BLUE COPPER PROTEIN 98 207 IPR039391 GO:0009055
Lele13g1056 241 FunFam Lamin-like protein 96 199 - -
Lele13g1056 241 Gene3D - 96 199 IPR008972 -
Lele13g1056 241 ProSiteProfiles Phytocyanin domain profile. 98 198 IPR003245 GO:0009055
Lele13g1056 241 SUPERFAMILY Cupredoxins 97 197 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1056 Lele-ChrLele13 21514056 21515883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1056 75 241 Phytocyanin Superfamily AT5G15350 46.512 6.52e-55 172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1056 13 21514056 21515883 Lele15g1411 15 8212308 8214115 hybridization