Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1053 ATGCCTACTCTTTTCTCTCTCCCTAGGTGCTTGGGAAGTTATTCTCACAGTAGTAGCAGCGGCGCCGGGGACAGTGGCATCGACGTCGTCGCCTATGATACTAGCCCAAACGCCAATTCGTCCGTCGAGTGCTATGCCTGCACTCAAGTGGGCGTTCCTGTCTTCCACTCTACCAGCTGCGACAGCTATCACCCGCCGCAATGGGAGGCTTCGGCTGGTTCTTCATTAATCCCTATCCAGCAGAACAAAACTGCGGCGAAGAATCCGAGGCAACGACCCAAATCGGGGGCGTTCGGGCGAGTGTTGGACCCGAGGAGCAAGCGCGTGCAGAGGTGGAATAGGGCGCTGCTGCTGGCGCGAGGGTTGGCGCTGGCGGTGGACCCATTGTTCTTCTACGCGCTGTCAATAGGGAGGGACGGGACTCCGTGCCTGTACATGGACGGCGGTTTAGCGGCGATAGTGACGCTGGTGAGGACTTTGGTGGACGTGGTTCACGTGTTCCACGTGTGGTTGCAGTTCAGGCTGGCGTACGTGTCGAAGGAGTCGATGGTGGTCGGCTGTGGGAAGCTGGTGTGGGACGCGCGTGCCATCGCAGTGCATTATCTGAGGTCCTTCAGAGGCTTCTGGTTTGACGCGTTTGTGATACTTCCCGTTCCTCAGGCAGTGTTCTGGCTGGTACTCCCAAAGTTGATAAGAGAAGAGCAAATTAAAATCATAATGACTATAATGCTATTGATCTTCTTGTTTCAATTTCTGCCCAAGGTTTACCATAGCATCTGCATGATGAGGAGGATGCAAAAGGTCACGGGCTATATCTTCGGCACCATTTGGTGGGGATTTGGCCTCAACCTCATAGCTTACCTTATTGCTTCTCACGTAGCAGGAGGGTGCTGGTATGTGCTTGCAATTCAACGTGTAGCGTCGTGCCTGAGGCAGCAGTGTGAAAGAGGGTATGGATGCGATTTCCCTCTATCATGTTCAGATGAAGTGTGTTACAAGTTTCTGTCACCAACAGGCACAGAAGGAACTTCATGTAATGGAAACTCCACAGTAGTGGCAAGAAAGCCATTGTGCTTAGATGTGCAAGGTCCTTTTAAATATGGGATCTACCAGTGGGCTCTCCCAGTCATTTCCAGCAACTCTTTGGCTGTCAAGATTCTTTATCCCATATTTTGGGGTTTGATGACCCTCAGCACTTTTGGCAATGAGCTTGAGCCCACGAGTAACTGGCTAGAAGTGATTTTCAGCATATGCATCGTACTCAGCGGACTAATGCTATTCACTCTGTTGATTGGTAACATCCAGGTATTCTTACACGCAGTAATGGCGAAGAAAAGAAAGATGCAGCTGAGATGTCGTGACATGGAATGGTGGATGAGGAGGAGGCAGCTTCCGTCCCCTTTAAGACATAGAGTTCGCCAGTATGAACGCCAGAGATGGGCAGCCATGGGAGGAGAGGACGAAATGGAATTGATCAAAGACTTTCCTGAAGGATTGAGGAGAGACATCAAGCGTTATCTTTGCTTAGACCTCATTAAAAAGGTACCTCTGTTTCACAACTTGGATGATCTTATCCTTGACAACATCTGTGATAGGGTTAAACCCCTAGTCTTCTCTAAAGATGAAAAGATAATAAGGGAAGGTGACCCAGTAACAAGAATAGTATTCATAGTTCGCGGGCGCATAAAACGCATGCAAAGCCTAAGCAAAGGCATGGTGGCCACAAGCGTCATCAAAGCTGGGGGTTTTCTGGGGGACGAGCTTCTCTCCTGGTGCCTTCGCCGGCCGTTCCTCGACCGGCTTCCGGCATCGTCCGCCACGTTCATATGCCTGGAATCAACAGAAACCTTTGGGTTGGAGGCAGATCACCTCAAGTACGTGACGGACCACTTCAGGTACAAGTTTGCCAACGAGAGGCTGAAGAGAACGACGAGATATTACTCATCGAATTGGAGAACGTGGGCTGCCGTGAACATACAGTTTGCATGGCGGCGATTCAGGCAGAGGACGAGAGGTCCGGTCACCCCTGTGATCGAAGGTGGGGTAAGCAGCAGTACTGAACGCAGGCTCTTGCAGTATGCTGCCATGTTCATGTCAATAAGGCCACATGACCACCTTGAATGA 2124 0.5085 MPTLFSLPRCLGSYSHSSSSGAGDSGIDVVAYDTSPNANSSVECYACTQVGVPVFHSTSCDSYHPPQWEASAGSSLIPIQQNKTAAKNPRQRPKSGAFGRVLDPRSKRVQRWNRALLLARGLALAVDPLFFYALSIGRDGTPCLYMDGGLAAIVTLVRTLVDVVHVFHVWLQFRLAYVSKESMVVGCGKLVWDARAIAVHYLRSFRGFWFDAFVILPVPQAVFWLVLPKLIREEQIKIIMTIMLLIFLFQFLPKVYHSICMMRRMQKVTGYIFGTIWWGFGLNLIAYLIASHVAGGCWYVLAIQRVASCLRQQCERGYGCDFPLSCSDEVCYKFLSPTGTEGTSCNGNSTVVARKPLCLDVQGPFKYGIYQWALPVISSNSLAVKILYPIFWGLMTLSTFGNELEPTSNWLEVIFSICIVLSGLMLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMRRRQLPSPLRHRVRQYERQRWAAMGGEDEMELIKDFPEGLRRDIKRYLCLDLIKKVPLFHNLDDLILDNICDRVKPLVFSKDEKIIREGDPVTRIVFIVRGRIKRMQSLSKGMVATSVIKAGGFLGDELLSWCLRRPFLDRLPASSATFICLESTETFGLEADHLKYVTDHFRYKFANERLKRTTRYYSSNWRTWAAVNIQFAWRRFRQRTRGPVTPVIEGGVSSSTERRLLQYAAMFMSIRPHDHLE 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1053 707 Pfam Ion transport protein 112 435 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele13g1053 707 Gene3D Helix hairpin bin 443 508 - -
Lele13g1053 707 SMART cnmp_10 517 643 IPR000595 -
Lele13g1053 707 Gene3D - 143 440 - -
Lele13g1053 707 Gene3D Jelly Rolls 515 633 IPR014710 -
Lele13g1053 707 SUPERFAMILY Voltage-gated potassium channels 103 438 - -
Lele13g1053 707 Coils Coil 703 707 - -
Lele13g1053 707 SUPERFAMILY cAMP-binding domain-like 444 631 IPR018490 -
Lele13g1053 707 CDD CAP_ED 517 624 IPR000595 -
Lele13g1053 707 ProSiteProfiles cAMP/cGMP binding motif profile. 517 596 IPR000595 -
Lele13g1053 707 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 90 670 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1053 Lele-ChrLele13 21497323 21500737 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1053 40 707 Ion Channels AT5G15410 76.844 0.0 1039