Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1035 ATGGCATTTATCAACAAGATTGGAAAGCTTCTCAAGCATTCTGCTGTGAAATGCATCGGACCAGAATTTTCTGCATCTACTCCATCAATTTACCAGGCAATCAGATCCATGTCATCTGCAAAACTTTTTATTGGAGGTGTTTCATATAACACAGATGATATGAGTTTGAGAGAAGCCTTTGGTCGCTATGGAGAGATAATTGATGCAAGGGTAATTATAGATCGTGAGACAGGAAGGTCCAGAGGATTTGGGTTTGTAACTTTTGCATCAAGTGAGGAGGCATCTGCTGCTATTCAGGCAATGGATGGTCAGGATCTTCATGGTCGGAGGATACGGGTAAACCATGCTACAGAGAGGTCACGTCCAGGCTTTGGTGCTGGCGGCTATGGCGGGGGTGGTTATGGCGGAGGAGGCTATGGTGGGGCCGGTTATGGTGGGGGAGGCTATGGCGGGGGCTCTGGTGGAAGTAACTATGGAGGTGATAATAACTTTAGGAATCCAAGTTATGGAAGCGGTGGTGATGGTTTTGGGGGCAGTGGAAATTATGGAGTTCCTGATCGTGCTGGTGGCAGTAATTACCAATTCAATCAAAGCTCAGGTGGAGATCTAGGCTTTGAACCAAGCGGCAATTCAAGTATGGGAGATGATGCTGGCCAATTCGGTGGCAACCAAAATGAAGGAACTGGCTTAGACGATGAAGATAATTTGAGAGAGAACAACGATGAAAACAACTTGAGAGAGAGCCGGTAG 750 0.4653 MAFINKIGKLLKHSAVKCIGPEFSASTPSIYQAIRSMSSAKLFIGGVSYNTDDMSLREAFGRYGEIIDARVIIDRETGRSRGFGFVTFASSEEASAAIQAMDGQDLHGRRIRVNHATERSRPGFGAGGYGGGGYGGGGYGGAGYGGGGYGGGSGGSNYGGDNNFRNPSYGSGGDGFGGSGNYGVPDRAGGSNYQFNQSSGGDLGFEPSGNSSMGDDAGQFGGNQNEGTGLDDEDNLRENNDENNLRESR 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1035 249 FunFam Glycine-rich RNA-binding protein 3 mitochondrial 22 143 - -
Lele13g1035 249 SUPERFAMILY RNA-binding domain, RBD 24 150 IPR035979 GO:0003676
Lele13g1035 249 MobiDBLite consensus disorder prediction 190 229 - -
Lele13g1035 249 MobiDBLite consensus disorder prediction 177 249 - -
Lele13g1035 249 Gene3D - 31 157 IPR012677 -
Lele13g1035 249 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 40 118 IPR000504 GO:0003723
Lele13g1035 249 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 36 193 - -
Lele13g1035 249 SMART rrm1_1 41 114 IPR000504 GO:0003723
Lele13g1035 249 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 42 112 IPR000504 GO:0003723
Lele13g1035 249 MobiDBLite consensus disorder prediction 230 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1035 Lele-ChrLele13 21371819 21373425 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1035 42 120 Eukaryotic Initiation Factors Gene Family AT4G34110 34.177 1.89e-08 52.8