Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1032 ATGAAGAAAAAACAGATCTTCCTTCATTTGGTGCTCATCGTCTGGTTCATGGTGGGGAGCAGTGGCATGGAAGCAGCAGAAAGAGTAAGAGAAGGAGAAGAAGCTGATAGGATCACAGAACTTCCTGGGCAACCAAAAGTATCGTTCCAGCAATTCTCAGGCTACGTCACTGTCAATCGCGTTGCTGGTAGAGCCCTCTTTTACTGGCTCACTGAATCCCCCCAAAACTCCCTCTCCAAACCCCTCGTCATCTGGCTCAATGGAGGTCCGGGTTGTTCATCGGTGGCTTATGGAGCATCCGAGGAGATAGGCCCGTTCAGGATCAATAGAACTGCTTCGGGCCTTTACCTTAACAAGTTCGCCTGGAACACCGTCGCCAACCTACTTTTCTTGGAAGCTCCCGCCGGCGTCGGCTTCTCCTACTCCAACCGCTCCTCCGATCTCTACGACACCGGCGACCGCCGCACCGCGAAGGACTCTCTGGAATTCATAATCAGATGGCTAGAACGATTCCCGCGATACAAGAATCGGGAACTTTATATCAGTGGAGAGAGCTACGCAGGGCATTATGTGCCTCAATTAGCTAGAGAAATCATCATGTATAATGCAAAAGCCAAGCACACAATCAATATCAAAGGGATTTTGGTTGGGAATGCGGTGACGGACAATTACTATGATAACTTGGGGACAGTGACGTACTGGTGGAGCCACGCTATGATCTCCGATCAGACTTACCGGCAGCTCATGAGCACCTGCGATTTCCACCGGCAAAAGGAATCCGATGAGTGTGAGTCCTTGTATAGCTACGCCATGGACCAAGAATTCGGTAACATTGATCAGTACAACATCTATGCTCCTCCATGCAACAACTCCGACGGCAGCTCCGCCACCACCCGCCGCTCCATGCGCTTGCCCCACCGCCCTCATCATCCGATATTTAGGCAAATGGCTGGGTATGATCCGTGTTCAGAGAAGTATGCTGAGATATACTACAATAAGCCTGATGTTCAGAAAGCCCTCCATGCCAACACAACAGCCATTCCTTACAAGTGGACTGCTTGCAGTGAGGTTCTGAATCGAAACTGGAACGATACAGATGTGTCCATGCTTCCCATTTACAGGGAGTTGATTGCACATGGAACCAGAGTCTGGGTTTTCAGTGGGGATGTTGATTCGGTGGTTCCAGTTACGGCAACTAGATATTCCCTCGCACAGCTCAAGCTGGCAACCAAGATTCCTTGGTATCCTTGGTACGTCAAGAAACAGGTTGGGGGGTGGACAGAGGTATATGAAGGGCTTACGTTCGCGACAGTGAGAGGGGCGGGTCATGAAGTGCCGCTGTTCAAGCCTAGAGCTGCTCTCCAGTTATTCAAATCATTCATTGCAGCAAAACCTCTTCCCAAGTCCTGA 1410 0.5028 MKKKQIFLHLVLIVWFMVGSSGMEAAERVREGEEADRITELPGQPKVSFQQFSGYVTVNRVAGRALFYWLTESPQNSLSKPLVIWLNGGPGCSSVAYGASEEIGPFRINRTASGLYLNKFAWNTVANLLFLEAPAGVGFSYSNRSSDLYDTGDRRTAKDSLEFIIRWLERFPRYKNRELYISGESYAGHYVPQLAREIIMYNAKAKHTINIKGILVGNAVTDNYYDNLGTVTYWWSHAMISDQTYRQLMSTCDFHRQKESDECESLYSYAMDQEFGNIDQYNIYAPPCNNSDGSSATTRRSMRLPHRPHHPIFRQMAGYDPCSEKYAEIYYNKPDVQKALHANTTAIPYKWTACSEVLNRNWNDTDVSMLPIYRELIAHGTRVWVFSGDVDSVVPVTATRYSLAQLKLATKIPWYPWYVKKQVGGWTEVYEGLTFATVRGAGHEVPLFKPRAALQLFKSFIAAKPLPKS 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1032 469 FunFam Carboxypeptidase 369 463 - -
Lele13g1032 469 Gene3D alpha/beta hydrolase 32 290 IPR029058 -
Lele13g1032 469 FunFam Carboxypeptidase 32 290 - -
Lele13g1032 469 ProSitePatterns Serine carboxypeptidases, serine active site. 181 188 IPR018202 GO:0004185
Lele13g1032 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 118 130 IPR001563 GO:0004185|GO:0006508
Lele13g1032 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 141 IPR001563 GO:0004185|GO:0006508
Lele13g1032 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 433 446 IPR001563 GO:0004185|GO:0006508
Lele13g1032 469 PRINTS Carboxypeptidase C serine protease (S10) family signature 167 192 IPR001563 GO:0004185|GO:0006508
Lele13g1032 469 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 38 450 IPR001563 GO:0004185|GO:0006508
Lele13g1032 469 Pfam Serine carboxypeptidase 43 462 IPR001563 GO:0004185|GO:0006508
Lele13g1032 469 FunFam Carboxypeptidase 318 466 - -
Lele13g1032 469 Gene3D - 322 359 - -
Lele13g1032 469 Gene3D - 369 462 - -
Lele13g1032 469 ProSitePatterns Serine carboxypeptidases, histidine active site. 433 450 IPR033124 GO:0004185
Lele13g1032 469 SUPERFAMILY alpha/beta-Hydrolases 38 466 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1032 Lele-ChrLele13 21360610 21364510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1032 327 466 Calmodulin-binding Proteins AT2G22960 30.496 2.38e-15 72.4