Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1029 ATGTTTCCTCCTTTTTGTACTTCACTGATCACATGGCGTTTCTTTCACAAGCCCTTGTCCCCCTTGCTTCTTCTGGAATTCTACTTTCTTTTCTGGGTCCTCTTCACGTCTTGGGGTGGCGCGTTTCCCGCCGATTCGGACAAATCAGTGCTTCTTCATTTCAAGAGTTCTGTCTCTGATCCGTCGGGGCTGCTTTTGAGCTGGAATTCCGCCGGAGATTCCAATCACTGTTCTTGGTTCGGTGTTCTCTGCGACTCGAATTCGCGGGTTGTCGCCCTCAACATTACTGGAAATGGTGGTCGAAGTAATCGAAGCTTTTCTCCGTGTTCTGATTCTGCTGAATTTCCACTTTATGGGTTCGGAATTAGGAGGAGCTGTGACAGCAGTAGGGGAGCATTGTTTGGTAAGGTTTCGCCTCTGATCAGTAAGCTTACTGAGCTCAGGATTCTGTCACTTCCGTTTAACGGTTTCGAGGGTGAAATTCCTTCTGAAATTTGGGGTATGGACAAGTTGGATGTTCTTGACCTAGAGGGCAACTCCATAACTGGGTCACTTCCGTCTCATTTTGATGGCTTGAGGAACTTGCGAGTTCTTAACCTCGGGTTTAATAAAATTGTCGGGGAGATACCGGACTCACTTGCACGTCTTGAAGGTTTGGAAATTTTAAATTTAGCAGCGAATGGCTTGAATGGATCTGTTCCTGGATTCAACGGTAAGTTGAAGGGGGTGTATCTACTGTTTAATCTGCTTAGTGGGCCTATACCACCTGAGATCGGGGATAACTGTGGGAAGCTTGAACATATGGATTTGTCAGGTAACTTCTTAGTTCAGCGAATTCCAAGCAGTTTGGGAAATTGTAGTCAATTACGGACACTTCTGTTGTATTCAAATTTGTTGGAAGAGGGAATTCCTTCCGAACTTGGTAGACTTAAGCTGCTTGAAGTATTGGATGTTTCAAGAAATGCTCTCAGTGGTCTAGTACCTCCCGAAATTGGGAATTGTTCGAACCTCTCTGTCCTTGTGCTATCAAATCTTTTCAATCCACTTCCTGAAGTCAACAATACTGTAAGGGAATCTTCGCAATTGGTTGCTATAAATGATGAATTGAATTATTTTGAAGGTGCCATGCCTGTGGAAATTACATCCCTCCCAAAGCTGAGAATATTATGGGCACCGAGGGCAACTCTGGAAGGTAGTTTCCCAAGCAGTTGGGGTGCTTGCGATAACTTAGAGATGGTCAATTTGGCTCAGAATTATTTCACTGGGGAATTTCCTAATCAGCTTAGTGGCTGCAGGAAGCTGCATTTTCTTGATTTAAGCTCGAACAACCTTACTGGAGAGCTTGCTGAAGAACTTCATGTTCCTTGTATGACTGTGTTTGATGTCAGTGGCAATATCTTGTCTGGTTCAATTCCTGAATTTTTTAATGGTACTTGTCCTTTAGTTCCTTCCTGGAATGGCAATCTGTTTGAACCTGACAATGTCTCAGTTCCATATATGTCCTTTTTTTCATCAAAGGTTGATGATGGATCCCTTTTGACTTCAGTGGGAGAAGTTGATCTTTCAGTTATTCACAATTTTGGGAACAACAATTTTACTGGCATGCAGTCATTGCCCATAGCGCATGACAGATTGGGGAAGAAAATGGGTTACGCCTTTCTTGTTGGAGAAAACAAGTTTACTGGGCCGTTACCTACCAACGTATTTGACAAGTGTGATGGATTAGATGCCTTGCTATTAAATGTCAGTTATAATAGGTTATCTGGCCATATTCCTGCAGAGTTTGGCGGAAATTGCAGGTCATTAAAGTTTTTGGATGCATCCGGTAATCGGATAACTGGACCAGTTCCTATTGGTTTAGGGGAATCAGTATCTCTAGTTTCTCTGAACCTTAGTCGGAATCAGTTACAAGGTTCAATTCCTGTCAGTCTTGGCCAGATGAAAAATCTGTTGTTTCTTTCCTTGGCCTCTAATAACTTAACTGGCTCCATTCCCCCCAACCTGGGGCAGTTGTACTCTCTAGAAGTTTTGGATCTTTCATCTAATTCTCTCACAGGTGAGATTCCAAAGGGTTTTGAGAACTTGAGAAATCTAACTGGCCTTTTTCTCAACAACAACAAACTTTCTGGACATATTCCTACTGGTCTGGCAAATTTCACTACACTCTCAGCATTTAATGTGTCCTTCAATAACTTGTCTGGATCATTGCCATCGAATAATAACTTTTTGAGATGCAGCAGTGCTGTTGGGAATCCATTTTTGCGTCCTTGCCATATGCTTTCCTTGACTGCGCCATCGACATATGAACAAGGGCAGGTAGCAGAATCAAATACTGCTGCAGCACCACCAGAAACTTCCAGCAAAGGTGGTGGGTCTGGCTTCAATTCTATTGAAATAGCATCTATAACGTCTGCATCAGCCATCGTTTCTGTTCTGATAGCCCTAATTATTCTGTTCTTTTATACCCGTAAGTGGAACTCCAGGTCCAGGGTTGTTGGTTCCACAAGAAAAGATGTTATTGTTTTTACTGACATTGGGGTTCCATTGACTTTTGAAACTGTCGTTCGTGCCACTGGTAATTTCAATGCAAGCAATTGCATTGGAAATGGGGGATTTGGAGCGACCTATAAGGCAGAGATAGCACCAGGAAATCTAGTGGCGATAAAACGTCTGTCGGTTGGACGATTCCAAGGTGTTCAGCAATTTGATGCAGAGATTAAGACCTTGGGAAGACTTCGCCATCCAAATCTTGTCACTTTGTTTGGTTACCATGCCAGTGAGACTGAGATGTTTCTGATATACAATTATCTGCCGGGTGGGAACCTGGAAAAGTTTATCCAGGATAGGTCAACAAGGGCTGTGGATTGGAGAATTCTTCACAAGATTGCATTGGACATTGCCCGAGCTCTTGCCTACCTCCATGATCAGTGTGTGCCACGCGTCCTCCATCGTGATGTGAAGCCCAGCAACATACTGTTGGATGATGATTTCAATGCATATTTGTCTGACTTTGGACTGGCCAGACTTCTGGGAACTTCTGAAACCCATGCTACCACAGGGGTGGCAGGAACATTCGGTTATGTAGCACCCGAGTATGCCATGACTTGTCGGGTTTCTGACAAGGCTGATGTGTACAGTTATGGAGTTGTACTTCTAGAGTTGCTATCAGACAAGAAGGCATTGGATCCTTCATTTTCATCCTATGGGAATGGCTTCAACATAGTAGCATGGGCATGCCTGCTACTTCGGCAAGGGAGAGGAAAGGAGTTCTTCACAGCAGGGTTATGGGATGCAGGACCGTCAGATGATTTGGTTGAGGTGTTGCACTTGGCCATTATGTGCACCGTCGATTCTCTCTCGACGAGACCGTCGATGAAACAGGTTGTACGAAGGCTAAAGCAACTTCAACCGCCATCATGCTAG 3423 0.44 MFPPFCTSLITWRFFHKPLSPLLLLEFYFLFWVLFTSWGGAFPADSDKSVLLHFKSSVSDPSGLLLSWNSAGDSNHCSWFGVLCDSNSRVVALNITGNGGRSNRSFSPCSDSAEFPLYGFGIRRSCDSSRGALFGKVSPLISKLTELRILSLPFNGFEGEIPSEIWGMDKLDVLDLEGNSITGSLPSHFDGLRNLRVLNLGFNKIVGEIPDSLARLEGLEILNLAANGLNGSVPGFNGKLKGVYLLFNLLSGPIPPEIGDNCGKLEHMDLSGNFLVQRIPSSLGNCSQLRTLLLYSNLLEEGIPSELGRLKLLEVLDVSRNALSGLVPPEIGNCSNLSVLVLSNLFNPLPEVNNTVRESSQLVAINDELNYFEGAMPVEITSLPKLRILWAPRATLEGSFPSSWGACDNLEMVNLAQNYFTGEFPNQLSGCRKLHFLDLSSNNLTGELAEELHVPCMTVFDVSGNILSGSIPEFFNGTCPLVPSWNGNLFEPDNVSVPYMSFFSSKVDDGSLLTSVGEVDLSVIHNFGNNNFTGMQSLPIAHDRLGKKMGYAFLVGENKFTGPLPTNVFDKCDGLDALLLNVSYNRLSGHIPAEFGGNCRSLKFLDASGNRITGPVPIGLGESVSLVSLNLSRNQLQGSIPVSLGQMKNLLFLSLASNNLTGSIPPNLGQLYSLEVLDLSSNSLTGEIPKGFENLRNLTGLFLNNNKLSGHIPTGLANFTTLSAFNVSFNNLSGSLPSNNNFLRCSSAVGNPFLRPCHMLSLTAPSTYEQGQVAESNTAAAPPETSSKGGGSGFNSIEIASITSASAIVSVLIALIILFFYTRKWNSRSRVVGSTRKDVIVFTDIGVPLTFETVVRATGNFNASNCIGNGGFGATYKAEIAPGNLVAIKRLSVGRFQGVQQFDAEIKTLGRLRHPNLVTLFGYHASETEMFLIYNYLPGGNLEKFIQDRSTRAVDWRILHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGTSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWACLLLRQGRGKEFFTAGLWDAGPSDDLVEVLHLAIMCTVDSLSTRPSMKQVVRRLKQLQPPSC 1140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1029 1140 Pfam Leucine Rich Repeat 264 286 IPR001611 GO:0005515
Lele13g1029 1140 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 825 936 - -
Lele13g1029 1140 Gene3D Transferase(Phosphotransferase) domain 1 937 1137 - -
Lele13g1029 1140 SMART serkin_6 861 1139 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g1029 1140 Pfam Leucine rich repeat 170 229 IPR001611 GO:0005515
Lele13g1029 1140 Pfam Leucine rich repeat 673 732 IPR001611 GO:0005515
Lele13g1029 1140 SUPERFAMILY L domain-like 296 477 - -
Lele13g1029 1140 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 255 348 - -
Lele13g1029 1140 PRINTS Leucine-rich repeat signature 434 447 - -
Lele13g1029 1140 PRINTS Leucine-rich repeat signature 671 684 - -
Lele13g1029 1140 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 361 538 - -
Lele13g1029 1140 ProSiteProfiles Protein kinase domain profile. 861 1135 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g1029 1140 Gene3D Phosphorylase Kinase; domain 1 823 936 - -
Lele13g1029 1140 FunFam Leucine-rich repeat receptor protein kinase EMS1 666 748 - -
Lele13g1029 1140 Pfam Leucine rich repeat N-terminal domain 44 85 IPR013210 -
Lele13g1029 1140 CDD STKc_IRAK 867 1135 - -
Lele13g1029 1140 Gene3D Ribonuclease Inhibitor 44 239 IPR032675 -
Lele13g1029 1140 SUPERFAMILY L domain-like 45 345 - -
Lele13g1029 1140 ProSitePatterns Serine/Threonine protein kinases active-site signature. 981 993 IPR008271 GO:0004672|GO:0006468
Lele13g1029 1140 SUPERFAMILY Protein kinase-like (PK-like) 843 1132 IPR011009 -
Lele13g1029 1140 SUPERFAMILY L domain-like 558 760 - -
Lele13g1029 1140 SMART LRR_typ_2 262 286 IPR003591 -
Lele13g1029 1140 SMART LRR_typ_2 695 719 IPR003591 -
Lele13g1029 1140 SMART LRR_typ_2 671 694 IPR003591 -
Lele13g1029 1140 SMART LRR_typ_2 310 334 IPR003591 -
Lele13g1029 1140 SMART LRR_typ_2 168 191 IPR003591 -
Lele13g1029 1140 SMART LRR_typ_2 192 216 IPR003591 -
Lele13g1029 1140 SMART LRR_typ_2 647 670 IPR003591 -
Lele13g1029 1140 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 937 1139 - -
Lele13g1029 1140 Gene3D Ribonuclease Inhibitor 551 765 IPR032675 -
Lele13g1029 1140 Gene3D Ribonuclease Inhibitor 240 348 IPR032675 -
Lele13g1029 1140 Gene3D Ribonuclease Inhibitor 349 546 IPR032675 -
Lele13g1029 1140 FunFam Leucine-rich repeat receptor protein kinase EMS1 569 665 - -
Lele13g1029 1140 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 311 1134 - -
Lele13g1029 1140 Pfam Protein kinase domain 864 1062 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g1029 1140 ProSitePatterns Protein kinases ATP-binding region signature. 867 889 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1029 Lele-ChrLele13 21341803 21345225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1029 44 1140 Receptor kinase-like Gene Family AT3G02130 66.070 0.0 1385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Lele13g1029 Pkinase 4.1e-43 CL0016