Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1026 ATGATTAAGATTCCGAAAGAGCAATCGGACGTTCCCAGAAAACAGGAAGATTCACCAAGTAATTATGCGAAAGCAAAGGCATCATCAACATCATCATCATGGAGCAGCATGGAACAGCAATGGGTGAGGTTGAAGGATCCGAGGATAGTGAGGGTGGCAAGATCCTGTGGAGGCAAAGACAGGCACAGCAAGGTTTGCACCATACGAGGTTTGAGAGACAGAAGAGTGAGGTTGTCGGTTCCTACAGCCATTCAATTGTATGATCTTCAAGAGAGGCTAGGGTTCAACCAACCCAGTAAGGTCATTGATTGGCTTCTTGATGCTGCCAAGAATGACATTGATGAACTTCCTCCTCTTCCACCATTAAATCTGGCCCTCCTTCATCATCATGCTATTCTCACCTCTAATAATAATTCTCAGCCTAACAAAGAAGAAGAAGCTGCAGGTGGTGGGTGGGAAGCTTCCAACAATAACACTACTTTCTGGAAATTGATAGAGCCCAAAGAAGCTTCCTCTTCTCATGAAGACGATGTTAAACAAGGAAGCAATAACGATAATGATCAGTTATCTCATCATGCTGTACAAGTTGTTCCACATCATCATCATCATCATCCCTCGTTTGTTGGGTACCAGTGGGAAGGTTCTGGATCAGGTGATCATGTTTCTCATCAGAGAGATATGCGAAGCATTAACGTTGTACCTTTCTCATCAACTTTGTCTTTGTCCACTGGGGATTCTTCTCATTATCATCATCATTTTGCTTCACATTTTGGAGCGAATATGGACATGGATCATAATAATATTCCAAGACAAGTCAACTATAATAACCAGCACTATCCCATGATGCTGCAGAATGCTAGTTCAAATCTGTACCCTATCTCCATGGCACAATCCTTGAATAAACCCTTTGGGTTGAGCATGATGACTCCTAACAACACTTCAGATCATCAGAGCCATCATCAGTCACAAAACCACCTTCAGAATTTTCCCACCAAGTGA 999 0.4264 MIKIPKEQSDVPRKQEDSPSNYAKAKASSTSSSWSSMEQQWVRLKDPRIVRVARSCGGKDRHSKVCTIRGLRDRRVRLSVPTAIQLYDLQERLGFNQPSKVIDWLLDAAKNDIDELPPLPPLNLALLHHHAILTSNNNSQPNKEEEAAGGGWEASNNNTTFWKLIEPKEASSSHEDDVKQGSNNDNDQLSHHAVQVVPHHHHHHPSFVGYQWEGSGSGDHVSHQRDMRSINVVPFSSTLSLSTGDSSHYHHHFASHFGANMDMDHNNIPRQVNYNNQHYPMMLQNASSNLYPISMAQSLNKPFGLSMMTPNNTSDHQSHHQSQNHLQNFPTK 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1026 332 ProSiteProfiles TCP domain profile. 58 116 IPR017887 -
Lele13g1026 332 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 20 329 IPR005333 GO:0003700
Lele13g1026 332 Pfam TCP family transcription factor 58 174 IPR017887 -
Lele13g1026 332 MobiDBLite consensus disorder prediction 135 155 - -
Lele13g1026 332 MobiDBLite consensus disorder prediction 306 332 - -
Lele13g1026 332 MobiDBLite consensus disorder prediction 196 222 - -
Lele13g1026 332 MobiDBLite consensus disorder prediction 1 20 - -
Lele13g1026 332 MobiDBLite consensus disorder prediction 1 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1026 Lele-ChrLele13 21316327 21317325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1026 41 210 TCP Transcription Factor Family AT3G02150 49.419 9.72e-47 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lele13g1026 TCP 3.2e-28 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1026 13 21316327 21317325 Lele15g1442 15 8421494 8422489 hybridization
Lele13g1026 13 21316327 21317325 Lele16g1469 16 8398713 8399726 hybridization