Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1018 ATGGCAGCCTCCGATTCGCGAGCCCACTCGTTCGGTCAGACTGAGATTAACTGGGACAAGCTAGATAAAACCAAGTTCTATGTTGTAGGAGCTGGACTCTTTACAGGAGTCACATTGGCACTCTACCCAGTTTCTGTAGTGAAGACTAGACTGCAGGTTGCCTCGAGGGATGCTGCAGAGAGAAATGCATTTTCTGTTATAAAGGGATTACTTAGAACAGATGGCGTTCCCGGTCTGTATAGAGGATTTGGCACAGTCATCACTGGTGCAATTCCTGCCAGAATCATATTTCTTACTACCCTAGAGACCACTAAGGTGGCCGCCTTCAGGATGGTCGAACCATTTAGACTCTCCGAAACCACCCAGGCAGCCATAGCAAATGGAGCTGCGGGCTTGACATCGTCACTTTTAGCTCAAGCTGTGTTTGTCCCAATTGATGTGGTGAGCCAAAAGTTGATGGTGCAAGGATACTCAGGTCATGCCCAATATAATGGCGGTCGGGATGTCGCTCGTAAAGTGTTAAGATCCGATGGCATCCGGGGATTATATAGAGGATTCGGTCTTTCTGTTATGACTTATGCTCCTTCCAGTGCTGTATGGTGGGCAAGCTATGGTTCAAGCCAACGCTTAGTTTGGAGATTCTTGGAACATAGTGCTGAAAATAAGGAAGGCAAACCTAGTGTGCAGAAAATCGTGTTAGTTCAGGCTACCGGAGGAATCATTGCTGGTGCAACTGCATCCTGCATTACAACACCATTGGATACTATTAAGACACGATTACAGGTGATGGGACATGAAAATAAAAGCTCTGTGAAACAAGTTGTCAAAGACTTGATAAACGAGGATGGTTGGAAAGGTTTATACAGAGGGTTAGGCCCAAGATTTTTCAGCATGTCGGCATGGGGTACTTCAATGATATTGGCTTATGAATATCTGAAGCGCTTGTGCGCAAAAGATGATTAG 963 0.4579 MAASDSRAHSFGQTEINWDKLDKTKFYVVGAGLFTGVTLALYPVSVVKTRLQVASRDAAERNAFSVIKGLLRTDGVPGLYRGFGTVITGAIPARIIFLTTLETTKVAAFRMVEPFRLSETTQAAIANGAAGLTSSLLAQAVFVPIDVVSQKLMVQGYSGHAQYNGGRDVARKVLRSDGIRGLYRGFGLSVMTYAPSSAVWWASYGSSQRLVWRFLEHSAENKEGKPSVQKIVLVQATGGIIAGATASCITTPLDTIKTRLQVMGHENKSSVKQVVKDLINEDGWKGLYRGLGPRFFSMSAWGTSMILAYEYLKRLCAKDD 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1018 320 ProSiteProfiles Solute carrier (Solcar) repeat profile. 122 210 IPR018108 -
Lele13g1018 320 Pfam Mitochondrial carrier protein 31 106 IPR018108 -
Lele13g1018 320 Pfam Mitochondrial carrier protein 234 319 IPR018108 -
Lele13g1018 320 Pfam Mitochondrial carrier protein 125 211 IPR018108 -
Lele13g1018 320 PRINTS Mitochondrial carrier protein signature 39 53 IPR002067 GO:0055085
Lele13g1018 320 PRINTS Mitochondrial carrier protein signature 183 201 IPR002067 GO:0055085
Lele13g1018 320 PRINTS Mitochondrial carrier protein signature 239 261 IPR002067 GO:0055085
Lele13g1018 320 FunFam Mitochondrial substrate carrier family protein 27 319 - -
Lele13g1018 320 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 4 319 - -
Lele13g1018 320 SUPERFAMILY Mitochondrial carrier 19 312 IPR023395 -
Lele13g1018 320 Gene3D Mitochondrial carrier domain 27 320 IPR023395 -
Lele13g1018 320 ProSiteProfiles Solute carrier (Solcar) repeat profile. 23 107 IPR018108 -
Lele13g1018 320 ProSiteProfiles Solute carrier (Solcar) repeat profile. 230 315 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1018 Lele-ChrLele13 21264451 21267640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1018 16 320 Chloroplast and Mitochondria Gene Families AT5G15640 76.873 2.51e-175 486
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1018 13 21264451 21267640 Lele15g1451 15 8476150 8479360 hybridization
Lele13g1018 13 21264451 21267640 Lele16g1478 16 8462101 8465163 hybridization