Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1017 ATGGTTTTCTGTTCGAAAGCAAGCTCCGGCATTCTACTTCGTTTCTTACGGGTTTGCTTTCACTTCCCTTCTACAGCAAATTCCACATTGCTGCAAAGGTGGTGTACTCAGCTCATTGGTACAGGATCCAACCAATGCGGTTGCTTCATTTCAGGTAACCGTGGCAATGCTGGAACCAATAACAGAACAGTCAAGGTGCCCAAAAACTTCACCTTGAATGCACCAGGACCAGGATATACTTGTGACCCAGCAAAAATTGTGAAACCCACTAAATTCGTACATCAGACAAAAGGAGAACAACACAAGCACTCATGCATATTGGAAAGATCTGAGCATTATTCTGTATATTGCAGTGACATGGAATGCATCATGTTAGGTTCAGCTCATTCGAAACCTGTGGTTCAATGTACTAATCATATGTGCCCGATCCAAGTCCACTGGCATGTTAAGGCTAACTACAAGGATTACTGGCGAGTTAAGATCACTGTTACCAATTTTAATTATGGGATGAATTATTCTGAGTGGAACTTGGCTGTTCAACACCCCAACTTTGACAATCTGGCCCAACATTTCGGTTTCAACTACAAGGGATTAACATTGAACGGAGCAATAAGTAATAAGTTACTTTGA 630 0.4175 MVFCSKASSGILLRFLRVCFHFPSTANSTLLQRWCTQLIGTGSNQCGCFISGNRGNAGTNNRTVKVPKNFTLNAPGPGYTCDPAKIVKPTKFVHQTKGEQHKHSCILERSEHYSVYCSDMECIMLGSAHSKPVVQCTNHMCPIQVHWHVKANYKDYWRVKITVTNFNYGMNYSEWNLAVQHPNFDNLAQHFGFNYKGLTLNGAISNKLL 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1017 209 PANTHER PROTEIN COBRA 55 103 IPR006918 GO:0010215|GO:0016020
Lele13g1017 209 Pfam COBRA-like protein 57 102 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1017 Lele-ChrLele13 21262160 21263727 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1017 55 206 COBRA Gene Family AT3G02210 46.970 8.65e-54 176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1017 13 21262160 21263727 Lele15g1453 15 8489130 8492465 hybridization
Lele13g1017 13 21262160 21263727 Lele16g1480 16 8475948 8479276 hybridization