Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1016 ATGGGTTTCTGTTTGATACCCGAAATTAGATCCCTCACGAAAGCAAGCTCCGGCATTCTATTTTTGTCCCTACTCACTTGCTTTTACTTCCCTTCTACAGAAGCTTATGATCCACTTGACCCGAATGGAAATATCACAATCAAATGGGATATCATCAGCTGGACCCCTGATGGTTATGTTGCTGTAGTTACTATGAACAACTTCCAACAATATCGTCACATTGCAGCACCAGGGTGGACTTTAGGATGGACATGGGCAAAGAAGGAGGTGATATGGAGTATGATAGGAGGACAGGCCACTGAACAAGGGGATTGTTCAAAATTTAAGGGAAACGTCCCACATTGCTGTAAAAAGAACCCAACAGTTGTAGATTTACTCCCTGGAACGCCTTACAATCAGCAAATTGCAAATTGCTGCAAAGGCGGGGTACTCGCCTCATGGGCACAGGACCCAACCAATGCGGTTGCTTCATTTCAGGTAAGTGTCGGCAGAGCTGGAACCACTAACAAGACAGTGAAGGTGCCTAAAAATTTTACCCTGAATGCCCCAGGACCAGGTTATACTTGTGGGCCGGGAAAAATTGTGCCACCCACTAAATTCATACAAGCAGACAAAAGGAGAGTAACACAAGCACTCATGACATGGAATGTAACGTGTACGTATTCACAATTTCTAGCTCAGAAAACTCCTACTTGCTGCGTCTCCCTGTCTTCTTTCTATAATGATACTATTGTACCTTGCCCAACATGTTCATGTGGCTGTCGGGGCAACTCATCTGCCTGTGTAGAGCCAGGTTCACCCCATCTGGAATCCGTTGTTTCTGGAAAAAATGGTTTGACACCTTTGGTTCAATGTACTAGTCATATGTGCCCAATTCGACTCCATTGGTATGTTAAGGTTAACTACAAGGAGTACTGGCGTGTTAAGATAACCATTACCAATTTTAATCACAGAATGAATTATTCTGAGTGGAACTTGGTTGTTCAACACCCAAACCTTGACAATCTGACCCAACTTTTCAGTTTCAACTACAAGGGACTAACACCATACGGAACAATAAATGATACAGCAATGCTCTGGGGAATTAAGTTCTACAATGATTTTCTAAACGAAGCTGGCCCTTCTGGTAATGTACAATCAGAGCTACTTTTCCGGAAGGATAAATCGACTTTCACTTTCGAAAAGGGCTGGGCTTTTCCTCGAAGGATCTATTTCAATGGTGACAATTGTGTGATGCCACCACCAGATGCATACCCTTGGTTGCCTAATGCAAGTTCCCGGCAAGAAGTTTCCATGCTCACCTTAATGATGTCTTGCTTGGTAGCCTTGGTCTTCTACACATTTGCTTGA 1350 0.4356 MGFCLIPEIRSLTKASSGILFLSLLTCFYFPSTEAYDPLDPNGNITIKWDIISWTPDGYVAVVTMNNFQQYRHIAAPGWTLGWTWAKKEVIWSMIGGQATEQGDCSKFKGNVPHCCKKNPTVVDLLPGTPYNQQIANCCKGGVLASWAQDPTNAVASFQVSVGRAGTTNKTVKVPKNFTLNAPGPGYTCGPGKIVPPTKFIQADKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTIVPCPTCSCGCRGNSSACVEPGSPHLESVVSGKNGLTPLVQCTSHMCPIRLHWYVKVNYKEYWRVKITITNFNHRMNYSEWNLVVQHPNLDNLTQLFSFNYKGLTPYGTINDTAMLWGIKFYNDFLNEAGPSGNVQSELLFRKDKSTFTFEKGWAFPRRIYFNGDNCVMPPPDAYPWLPNASSRQEVSMLTLMMSCLVALVFYTFA 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1016 449 PIRSF COBRA 9 449 IPR006918 GO:0010215|GO:0016020
Lele13g1016 449 PANTHER PROTEIN COBRA 25 439 IPR006918 GO:0010215|GO:0016020
Lele13g1016 449 Pfam COBRA-like protein 59 222 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1016 Lele-ChrLele13 21256706 21259978 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1016 1 446 COBRA Gene Family AT3G02210 72.284 0.0 684
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1016 13 21256706 21259978 Lele15g1454 15 8493016 8495122 hybridization
Lele13g1016 13 21256706 21259978 Lele16g1481 16 8479922 8481991 hybridization