Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1012 ATGATGGGTTCAGAGAAAGCGTGGAAGAAAGGGCCTTGGACTCTTGAAGAGGATAAGCTTCTCAGTGAATATGTGAGCTTGCATGGTGAAGGAAGGTGGAGTTCAGTAACCAAGTTTACAGGGTTAAATAGGAGTGGGAAAAGTTGCAGGTTGAGGTGGGTGAACTATTTGAAGCCAGGCCTGAAGAAAGGCCACTTGACACCTCAAGAAGAAGCCATCATATTTGAAATCCATGCTATGCTGGGTAACAAAACAGATAATGAGATCAAGAACTACTGGAGAACCCACTTCAAGAAGAAAGACAAATCCTCTCGTATTAATAAGAAGCAAGAGAAGAGAAGATCAAGAATTCTAAAACAGATGAAACAACAAGAGCAGCAGCAGCAGCAACAACAACAACCTGAACAGTACGATGTACAAAGCAGCATGTCGTCTCATGCAGAGTCAAACAATCAAACAAACGTGTCTGCTGGGACGTCTGTTCGAGAAGATAACTACCATCCAGTTACAACCATGGAAGACCAATATAATTACTTGATGCCTTTCATGTACCAAGATTGCTTTCCATCCTCGTGGCCTGAAAACACTACGGTAGAACAAGATGAAGGCTTGTTGGTTACGTTATGGAACCTTGACGAAGAAACACAAGCTCGTCACGGGGACAATAATCATCAGTTCAACGAAAATGCCATTCATCATCATACTTGTTTCGATGATATTTCCAACAGCCTCTGCTTTGAAAAATACATGTCCGGCTGA 759 0.4229 MMGSEKAWKKGPWTLEEDKLLSEYVSLHGEGRWSSVTKFTGLNRSGKSCRLRWVNYLKPGLKKGHLTPQEEAIIFEIHAMLGNKTDNEIKNYWRTHFKKKDKSSRINKKQEKRRSRILKQMKQQEQQQQQQQQPEQYDVQSSMSSHAESNNQTNVSAGTSVREDNYHPVTTMEDQYNYLMPFMYQDCFPSSWPENTTVEQDEGLLVTLWNLDEETQARHGDNNHQFNENAIHHHTCFDDISNSLCFEKYMSG 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1012 252 MobiDBLite consensus disorder prediction 99 166 - -
Lele13g1012 252 SMART sant 9 59 IPR001005 -
Lele13g1012 252 SMART sant 62 99 IPR001005 -
Lele13g1012 252 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele13g1012 252 FunFam Myb transcription factor 10 62 - -
Lele13g1012 252 Gene3D - 9 63 - -
Lele13g1012 252 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 5 173 IPR044676 GO:0003700|GO:0006355|GO:0043565
Lele13g1012 252 Pfam Myb-like DNA-binding domain 10 57 IPR001005 -
Lele13g1012 252 SUPERFAMILY Homeodomain-like 8 93 IPR009057 -
Lele13g1012 252 Coils Coil 107 128 - -
Lele13g1012 252 CDD SANT 12 57 IPR001005 -
Lele13g1012 252 MobiDBLite consensus disorder prediction 99 116 - -
Lele13g1012 252 MobiDBLite consensus disorder prediction 121 166 - -
Lele13g1012 252 ProSiteProfiles Myb-like domain profile. 5 57 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1012 Lele-ChrLele13 21215076 21216053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1012 9 236 MYB Transcription Factor Family AT3G30210 43.373 6.05e-59 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele13g1012 Myb_DNA-binding 1.8e-16 CL0123