Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0988 ATGATGTCCCTCGTGCTATCCCCCCAATACCTTTTGCTTTATGTGTTGAGGCATGCCAATTTCCTTTACACTACCCCAAACCTGTCTTTTCCTTTTGGGTCTGGCACGAGAGTTTTGGTGAATGGGATTCTGGCATGGAAAGCAGCAAGTTCACTTCTCTCTTCTTCTGAAAACCATTGCAAAGAAAGAAAGAACTCTCCATTCTCCAGAACTTGTGTCTGGTTTCTGGGACATTACAATTGTATGGGGAAACTAAGAGAAGCTGTTCTTTGTTTCGTGGCACTATTTTGGTTATGGGGTTCTGCAAATGGTGTTCTTTCTCCTAAAGGAGTGAACTTTGAAGTGCAAGCTTTAATGGGCATAAAAGCTTCTCTGCGGGATCCTCATGGTGTCTTAGATAATTGGGATGCGGATGCAGTTGATCCTTGTAGCTGGACTATGGTTACCTGTTCGCCGGACAACTTGGTCATTGGCCTGGGTACTCCCAGTCAAAGTCTATCAGGTACTCTGTCTCCGAGCATAGGCAACCTAACGAACCTTCAGATCGTGTTGCTACAGAATAATAATATAACAGGTCGAATACCTTCAGAGCTGGGCAGGCTTTCAAATCTTCATACACTTGATCTCTCTAATAACTTGTTCAGTGGGGAAATTCCTCCCTCTCTCGGTCACCTGAGAAGTCTCCAATACTTAAGGCTCAACAATAACAGTCTTTCTGGAGAATGTCCAGAACCACTGGCTAACATGACACAGCTTGCTTTTCTTGACTTGTCCTATAACAACCTCAGTGGCCCTATGCCCAGAATTTTGGCCAAATCATTCAACATTGTCGGAAACTCTCTTGTCTGTGGTACGGGGAAAGAGACAAAATGCTATGGCATGACGACATTGATGCCCATGTCCATGAACTTGAACACTACAGAGGGCAAAACAAAATCACACAAGATCGCCATTGCCTTTGGCTTAAGTCTAGGATGCCTTTGCTTGATAGTTCTTGGTTTTGGGCTATTCCTATGGTGGAGGCACAAGCATAACCAACAGGCATTTTTTGATGTCAAAGACCGGTATCATGAAGAAGTATACCTTGGAAACCTGAAGAGGTTCCAATTCAGAGAACTGCAGATAGCTACACACAACTTCATCAGCAAGAACATTCTGGGAAAGGGTGGCTTTGGAAATGTGTACAAAGGAGTGCTCTCAGATGGAACTCTTGTAGCTGTCAAGAGGCTTAAAGATGGCAATGCCATAGGAGGAGAGATCCAATTTCAGACTGAAGTTGAAATGATTAGCTTAGCAGTGCACCGAAACCTCCTCAGACTCTACGGTTTCTGCATGACACCAACTGAAAGGCTTCTGGTTTACCCTTACATGTCTAATGGAAGTGTTGCTTCCCGTCTCAAGGCTAAACCAGTGTTAGACTGGGGCACTAGGAAGCAAATTGCCTTGGGGGCAGCCAGGGGACTGTTATACCTACATGAGCAGTGTGATCCAAAGATAATTCATAGGGATGTGAAAGCTGCAAACATATTGCTTGATGATTATTGTGAGGCAGTGGTTGGAGATTTTGGGTTGGCAAAGCTTTTGGATCACCGAGATTCACATGTTACAACTGCAGTGAGAGGAACTGTAGGGCATATTGCCCCTGAGTATCTCTCCACAGGGCAATCCTCTGAGAAAACTGATGTTTTTGGATTTGGCATCCTCCTTCTTGAACTGATCATAGGCCAGAGGTCTCTGGAATTTGGAAAGGCAGCAAACCAGAAAGGAGCCATGCTAGATTGGGTGAAGAAAATTCATCAGGAGAAGAAGCTGGAACTGTTCGTGGACAAGGATCTGAAGAATAACTATGACAGGATTGAGCTGGAAGAAATGGTTCAAGTGGCTCTCTTGTGTACTCAGTACCTTCCTGGCCACAGGCCCAGAATGTCTGAAGTAGTAAGGATGCTTGAAGGAGATGGATTGGCAGAAAGATGGGAAGCTTCTCAGAGAGCTGATATGAGCAAGTGCAAGGCTCCTGAATTGTCTTCGTCTGATCGATATTCGGATCTCACTGATGACTCTTCGATGCAAGTCCAGGCGATGGAGCTTTCAGGTCCGAGAGATCCGCCGGAAACAGTGGTGGAAGGATATGGCAGATGGGGTGTATTCGGCCAATTAGTGCCATCTCATGCTCTATGTTTGCCTGATTCAGCTTCTAAGGGTAGGGTATATCGTTGGGGATTGAATGGAGTATCCAGAACAAGTAAGTGGATGGGAGCAGCACGTAGGCATGGCATGGTGTTGGTAGTTGCATGTTCAAATCGCAGGCGCCAGGCGGCTGCAGCAACTGATGCCTTCTCACAGATGCCTTCGTCTTGTCCCATCAACTCATAA 2373 0.4564 MMSLVLSPQYLLLYVLRHANFLYTTPNLSFPFGSGTRVLVNGILAWKAASSLLSSSENHCKERKNSPFSRTCVWFLGHYNCMGKLREAVLCFVALFWLWGSANGVLSPKGVNFEVQALMGIKASLRDPHGVLDNWDADAVDPCSWTMVTCSPDNLVIGLGTPSQSLSGTLSPSIGNLTNLQIVLLQNNNITGRIPSELGRLSNLHTLDLSNNLFSGEIPPSLGHLRSLQYLRLNNNSLSGECPEPLANMTQLAFLDLSYNNLSGPMPRILAKSFNIVGNSLVCGTGKETKCYGMTTLMPMSMNLNTTEGKTKSHKIAIAFGLSLGCLCLIVLGFGLFLWWRHKHNQQAFFDVKDRYHEEVYLGNLKRFQFRELQIATHNFISKNILGKGGFGNVYKGVLSDGTLVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCMTPTERLLVYPYMSNGSVASRLKAKPVLDWGTRKQIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELIIGQRSLEFGKAANQKGAMLDWVKKIHQEKKLELFVDKDLKNNYDRIELEEMVQVALLCTQYLPGHRPRMSEVVRMLEGDGLAERWEASQRADMSKCKAPELSSSDRYSDLTDDSSMQVQAMELSGPRDPPETVVEGYGRWGVFGQLVPSHALCLPDSASKGRVYRWGLNGVSRTSKWMGAARRHGMVLVVACSNRRRQAAAATDAFSQMPSSCPINS 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0988 790 FunFam Putative LRR receptor-like serine/threonine-protein kinase 111 293 - -
Lele13g0988 790 Gene3D Ribonuclease Inhibitor 111 293 IPR032675 -
Lele13g0988 790 ProSiteProfiles Protein kinase domain profile. 380 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0988 790 Gene3D Phosphorylase Kinase; domain 1 349 456 - -
Lele13g0988 790 Pfam Leucine rich repeat 178 238 IPR001611 GO:0005515
Lele13g0988 790 Gene3D Transferase(Phosphotransferase) domain 1 457 669 - -
Lele13g0988 790 ProSitePatterns Serine/Threonine protein kinases active-site signature. 499 511 IPR008271 GO:0004672|GO:0006468
Lele13g0988 790 SUPERFAMILY Protein kinase-like (PK-like) 356 650 IPR011009 -
Lele13g0988 790 Pfam Protein kinase domain 382 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0988 790 FunFam Somatic embryogenesis receptor kinase 1 349 456 - -
Lele13g0988 790 FunFam Somatic embryogenesis receptor-like kinase 1 457 669 - -
Lele13g0988 790 Pfam Leucine rich repeat N-terminal domain 114 151 IPR013210 -
Lele13g0988 790 SMART serkin_6 380 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0988 790 SUPERFAMILY L domain-like 114 276 - -
Lele13g0988 790 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 94 660 - -
Lele13g0988 790 ProSitePatterns Protein kinases ATP-binding region signature. 386 408 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0988 Lele-ChrLele13 21050758 21055820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0988 82 700 Receptor kinase-like Gene Family AT5G16000 78.006 0.0 991
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lele13g0988 Pkinase 2.3e-43 CL0016