Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0977 ATGCTGCTGGTAATGAAATTTGGCTGTGATGACAAACACAATTATGTTGTAACTATGTTGATGATGGAGATGATATATAATTTGTGGTGGTCCCGTGCAACCATTGCTTTAATTCCTTCTCATGGAATAATAAGCCACGATGAGCCAAAGGGGCAACTAATGTACAGTGAAAGCCCGCAGGAAAATCTGCAGAAGCTCACCATTTTCTATGACGGGAAGATGTGTGTTTGCGATGTCACCGAGTTTCAGGCTAGATCGATCTTGATGCTGGCAAATAGAGAAATGAAGGAAAGAGCAAGGACCCCAAACGGGTCGGAGCCATCTTCACCAAACACAGTGCCACTGTATAGCCCAAGCAGTGGTCTTTCCATGAAAAGATCACTGCAAAATTTCCTGCAGAAGAGAAAGAATCGAATCCTTGAAGCTTCACCGTACCATCACTAG 444 0.4369 MLLVMKFGCDDKHNYVVTMLMMEMIYNLWWSRATIALIPSHGIISHDEPKGQLMYSESPQENLQKLTIFYDGKMCVCDVTEFQARSILMLANREMKERARTPNGSEPSSPNTVPLYSPSSGLSMKRSLQNFLQKRKNRILEASPYHH 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0977 147 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 58 145 IPR040390 -
Lele13g0977 147 Pfam tify domain 63 92 IPR010399 -
Lele13g0977 147 MobiDBLite consensus disorder prediction 95 121 - -
Lele13g0977 147 Pfam Jas motif 125 145 IPR018467 -
Lele13g0977 147 MobiDBLite consensus disorder prediction 102 121 - -
Lele13g0977 147 SMART tify_2 59 93 IPR010399 -
Lele13g0977 147 ProSiteProfiles Tify domain profile. 59 93 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0977 Lele-ChrLele13 20959480 20965152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0977 59 146 Tify Gene Family AT1G30135 52.747 1.22e-23 87.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lele13g0977 tify 9.7e-12 No_clan