Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0967 ATGCACACCCCTAATATTATTCGTGGGAGTCCAGATGTGAAGTGGGAAAGCATCAAGGGGTTAGAAACGGCCAAACGCTTAATGAAAGAGGCTGTTGTAATGCCAATCAAGTATCCCAAATACTTTACTGGCCTATTATCACCTTGGAAAGGGATTCTTCTCTTTGGGCCACCAGGGACAGGAAAGACAATGCTTGCAAAGGCCGTTGCAACAGAGTGCAAGACTACATTTTTTAATATTTCTGCATCCTCTGTTGTCAGCAAATGGAGAGGCGATTCGGAGAAGTTAGTTAGGGTTCTATTTGAGCTTGCTAGGCATCATGCACCCTCAACAATATTTCTTGATGAGATTGATGCAATCATTAGTCATCGTGGTGAATCACGCAGTGAGCATGAAGCAAGTAGGCGGTTAAAAACTGAGCTACTTATACAGATGGATGGCTTGACACGGACTGATGAACTTGTTTTTGTTTTGGCGGCAACAAATATTCCCTGGGAACTGGATGCAGCCATGCTCCGACGTCTTGAGAAGCGAATCCTTGTGCCGCTTCCTGAACCAGAAGCAAGAAAAGCAATGTTTGAGGAACTCCTTCCACCACAGCCTGGTGAGGAGCATATGCCCTATGATTTATTGGTGGAGCAGACAGAAGGATATTCAGGTTCAGATATCCGGTTACTCTGCAAAGAGGCAGCAATGCAGCCATTGAGACGCTTAATGTCACAACTTGAACAGAGAGAAGAGGTGGTGCCGGAAGAAGAGTTGCCAAAAGTAGGGCCTATCGGACCTAAAGATATAGAGATTGCTTTGAAGAACACAAGGCCATCTGCTCATCTCCATGCCCACAAATATGAGAAGTTCAATGCTGATTATGGAAGTCAAATACTGCAATGA 891 0.4478 MHTPNIIRGSPDVKWESIKGLETAKRLMKEAVVMPIKYPKYFTGLLSPWKGILLFGPPGTGKTMLAKAVATECKTTFFNISASSVVSKWRGDSEKLVRVLFELARHHAPSTIFLDEIDAIISHRGESRSEHEASRRLKTELLIQMDGLTRTDELVFVLAATNIPWELDAAMLRRLEKRILVPLPEPEARKAMFEELLPPQPGEEHMPYDLLVEQTEGYSGSDIRLLCKEAAMQPLRRLMSQLEQREEVVPEEELPKVGPIGPKDIEIALKNTRPSAHLHAHKYEKFNADYGSQILQ 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0967 296 CDD AAA 46 183 - -
Lele13g0967 296 Gene3D - 11 287 IPR027417 -
Lele13g0967 296 Gene3D - 184 272 - -
Lele13g0967 296 FunFam Katanin p60 ATPase-containing subunit A-like 2 184 272 - -
Lele13g0967 296 PANTHER AAA DOMAIN-CONTAINING 5 292 - -
Lele13g0967 296 FunFam Katanin p60 ATPase-containing subunit A-like 2 11 195 - -
Lele13g0967 296 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 279 IPR027417 -
Lele13g0967 296 SMART AAA_5 48 185 IPR003593 -
Lele13g0967 296 Pfam AAA+ lid domain 210 246 IPR041569 -
Lele13g0967 296 Pfam ATPase family associated with various cellular activities (AAA) 52 182 IPR003959 GO:0005524|GO:0016887
Lele13g0967 296 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 56 75 - -
Lele13g0967 296 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 188 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0967 Lele-ChrLele13 20858806 20862390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0967 46 255 Calmodulin-binding Proteins AT3G56690 37.500 4.22e-34 129