Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0957 ATGCTGTCTTACTCAATATTTAAACTTCGAATTTTGAGAAAGGTTAGAGAGCCAAAGGAGGAGAATGTCACTCTTGGTCCAACTGTTAGAGACGGTGAACATGTTTTCGGTGTAGCCCATATTTATGCATCATTTAACGACACCTTCATTCACGTGACTGATTTGTCTGGGAGAGAAACACTTGTCCGCATCACTGGTGGAATGAAGGTTAAAGCTGACAGAGACGAGTCTTCCCCTTATGCTGCTATGCTTGCTGCACAGGATGTATCTGCTAGATGCAAGGAACTTGGCATCACTGCTCTTCATATCAAGCTCCGGGCCACTGGTGGAAACAAGACAAAGACACCCGGTCCTGGTGCTCAGTCTGCTCTCCGTGCCCTTGCTCGTTCTGGAATGAAAATTGGTCGTATAGAGGATGTGACTCCAATTCCTTCCGATAGTACTCGCAGAAAGGGTGGTAGAAGAGGTAGAAGGCTTTAA 480 0.4604 MLSYSIFKLRILRKVREPKEENVTLGPTVRDGEHVFGVAHIYASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSARCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRRGRRL 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0957 159 FunFam 40S ribosomal protein S14 10 159 - -
Lele13g0957 159 Pfam Ribosomal protein S11 37 155 IPR001971 GO:0003735|GO:0005840|GO:0006412
Lele13g0957 159 Gene3D Ribosomal protein S11 11 159 IPR036967 GO:0003735|GO:0005840|GO:0006412
Lele13g0957 159 PIRSF RPS11p_RPS11a_RPS14e_RPS11o 10 156 IPR001971 GO:0003735|GO:0005840|GO:0006412
Lele13g0957 159 MobiDBLite consensus disorder prediction 139 159 - -
Lele13g0957 159 SUPERFAMILY Translational machinery components 32 157 - -
Lele13g0957 159 Hamap 30S ribosomal protein S11 [rpsK]. 8 156 IPR001971 GO:0003735|GO:0005840|GO:0006412
Lele13g0957 159 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 13 154 IPR001971 GO:0003735|GO:0005840|GO:0006412
Lele13g0957 159 ProSitePatterns Ribosomal protein S11 signature. 124 146 IPR018102 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0957 Lele-ChrLele13 20768645 20770242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0957 13 148 Cytoplasmic Ribosomal Protein Gene Family AT3G52580 89.706 2.57e-90 258