Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0945 ATGAAGTTTTGGAGAGATCTGGAGCAAATTGGACTCACCGCCAAAGAATTACGGAATATGGCATTCTCTCTTGTCAAAATCTCCTGTTGTCTTCATGTCGCTGCCAACTATCTCGTGAAACCTATTATTGGCGATGGTCCTAGCATGCTTCCAACAATGGGTCCGAACCCTATGTTTTTATTGACCGAAAGGATCTCCCCCCGTTTTGGTCAAGTTGAGCGCGGGGATATTGTCGTTGTGCAGTCACCTGAAAACCCTCGAAAGATCGTGACCAAGCGCTTGCTTGGATTGGAGGGTGATAGTGTCATATTTCTTGTCGATCCTAAGAACAGTGATAAATGCGAGACTGTAGTGGTTCCCAAGGGACACGTTTGGGTACAGGGAGATAACATATATAATTCCAGGGATTCAAGACAATTTGGTCCTGTACCTTATGGTCTTCTTCATGCCAAGGTCTTTTGGAGGTTATGGCCACCTGCAGGTTTTGGACCACTGGGCAAAAACTGA 507 0.4576 MKFWRDLEQIGLTAKELRNMAFSLVKISCCLHVAANYLVKPIIGDGPSMLPTMGPNPMFLLTERISPRFGQVERGDIVVVQSPENPRKIVTKRLLGLEGDSVIFLVDPKNSDKCETVVVPKGHVWVQGDNIYNSRDSRQFGPVPYGLLHAKVFWRLWPPAGFGPLGKN 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0945 168 CDD S26_SPase_I 45 152 IPR019533 GO:0004252|GO:0006465
Lele13g0945 168 Gene3D Umud Fragment, subunit A 35 162 - -
Lele13g0945 168 SUPERFAMILY LexA/Signal peptidase 40 165 IPR036286 -
Lele13g0945 168 Pfam Signal peptidase, peptidase S26 113 157 IPR019533 GO:0004252|GO:0006465
Lele13g0945 168 Pfam Signal peptidase, peptidase S26 18 103 IPR019533 GO:0004252|GO:0006465
Lele13g0945 168 FunFam Inner membrane protease subunit 1 35 164 - -
Lele13g0945 168 PRINTS Bacterial leader peptidase 1 (S26A) family signature 119 138 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lele13g0945 168 PRINTS Bacterial leader peptidase 1 (S26A) family signature 37 53 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lele13g0945 168 PRINTS Bacterial leader peptidase 1 (S26A) family signature 90 102 IPR000223 GO:0006508|GO:0008236|GO:0016020
Lele13g0945 168 PANTHER PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED 13 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0945 Lele-ChrLele13 20723190 20724037 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0945 49 166 MADS-box Gene Family AT1G29960 57.627 2.05e-47 149