Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0943 ATGATGCCTCCAAAGATCAGTTTGAATATACTCATAATAGTCTTGTCCATTTCCATTTCAACTATATTTTCAAATATCGCAGAATCAAGCTCACTACTGCAAGTTGAAATTGAAGCTTTGAAAGCTTTCAAAAGCTCTATCACCCATGACCCAAATGGAGCATTGGCAGATTGGGTTGACACAAGCCATCATTGCAACTGGTCTGGCATTGCTTGTGACCCTTCTTCACAACATGTTATCTCACTCACCCAGGTTGGCAAAAAGCTCCAAGGTAAGATTTCACCGTTCCTGGGAAATCTTTCAGGCCTTCAGGTTCTTGACTTAACCTCAAATTCATTTTCTGGGTTCATTCCTCCTCAGCTCAGCTTTTGCTCCCAACTTACTCAATTGCTTCTTTTTGAAAACACTCTCTCTGGTCCAATCCCAACTGAGCTAGGAAACTTGAAAAGTCTGCAGTATTTGGATTTGGGTAGTAACAATCTGAATGGAAGTCTCCCAGAAAGCTTATTTAACTGCACGTCTTTGCTGGGTATTGCTTTTAATTCTAACAATCTGAATGGTGAAATCCCTTCAAATATTGGCAATTTGGTTAACGTTACACAAATTGCAGGATTTACTAATCAGTTTGTTGAATCTATTCCTCCTTCCATAGGTAAGTTAAGGGATTTACAATCTCTAGATTTTAGTCAAAACCAGTTGTCTGGAAAGATACCTAGAGAGATTGGGAATCTGGGAAACCTAGAATATCTTGTCCTATTTGAAAATTCCTTGGTTGGAAATATCCCTTCTGAACTTGGTGAGTGCATGAAGCTAGTGAACCTTGAACTGTACACAAATCAGTTGTCCGGAAGCATTCCTACTGAGCTAGGAAACTTAGTTCTTTTGGAAACATTAAGGATATATGATAATAACTTCACTTCCACAATTCCTTCTTCCATTTTCCAGCTGAAATCATTAACCCACTTGGGTCTGTCAGAGAATCGGTTAGAGGGAATAATATCTCCTGAAATTGGATCTTTGAGGTCACTTAAAGTTCTAACCTTGCATTCAAATAAGTTTACTGGACAAATTCCTTCAGCAATTACAGAGTTGACAAACTTAACGTATCTCTCCATGAGCCAGAATCTCCTTTCAGGTAAACTTCCTTCCAGCATAGGATTGCTTCATAATCTGAAGTTTCTTGTCCTGAACGGCAACCTTTTTCATGGTCATATCCCTCCTAGTATCACCAATTGTACTGGTATGGTGAATGTAAGTTTGAGCTTTAATTCCCTAAGTGGGAATATTCCAGAAGGCTTTTCAAGGATGCCTAATCTTACTTTCTTGTCTTTCTCATCAAACAAAATGTCTGGTGAAATCCCAGATGACCTCTTCAACTGCTCAAATCTTCTAACTCTGAGTTTGGGTGAGAACAATTTCAGTGGGATGATAAAACCTACTATAAAAAACCTGTTGAATCTCAAGACACTTCAACTGAATTTAAATTCTTTGACAGGGCCAATTCCACTTGAGATAGGGAATTTAAATCAACTTGTGACATTAACACTTTCTCATAATAGATTTTCTGGTCAAATTCCTTTAGAGCTATCCAATCTCAGTCTTCTTCAGGGCCTCTTCTTGCAAGGGAATGCATTAGAAGGAACAATACCTAATCAATTATTTGAACTGAATCAACTAACCGAGCTTAATCTACATCAGAACAACCTGGTTGGTCAAATCCCAAAGGCTTTCTCCAAGTTTAAGATGCTTTCTCACTTAGACCTCCATGGGAACATGTTCAATGGAACAATTCCAAGAGAGTTGAGTCAACTCAGCCAGATCTTAATGTTGGATTTGTCAAAGAACCACCTGACAGGTTCAATTCCTGGGGATGTCATCGCACATTTCAGAGACATGCAACTAAATCTAAACTTGTCTCATAACCACTTCATCGGAGTTATACCAGAAGAGCTTGGTATGTTGGAAATGATACAAGACATTGATGTTTCAAACAACAATCTATCTGGCGTGATTCCCAAGACACTTTCTGGGTGCAGAAATCTATATAATCTTGATCTTTCAGGCAATAGTATCTCAGGTCCTATTCCAGCAAAGGCTTTCAATCGCATGGACTTACTTCAAAGCTTGAACCTTTCAAGGAACCAGTTAGATGGAGAAATCCCTGAAACATTGTCAAAGCTTGATCATCTTATTTCCTTAGACCTTTCTCATAATAACTTGAAGGGATCTATCTCTGATAATTTTGCCAATCTCTCCAATCTAAAGCTTCTCAACCTTTCTTTTAACCAACTTGAAGGTCAAGTTCCATCAAGCGGAATATTCTCACACATAGAGGCATCTGCATTGATAGGAAACCCTGCTCTTTGTGGAACCAAATTTCTGATGCCATGTAGGGAAACAAGGAGATCTCATTCATTGTCCAAGAAGAGCATATCTATTATTGCCTCACTTGGTTCTGTTGTAGTCCTCCTAATTTTGGTATTGGTGATTCTATTTCTCATTCAACGTGCCAGATTGCGTCGTTCTAACAAGCCTGAGAATCCTGGAGTACCAAGCTACACATCAGCTTTGACACTTGAAAGATTTGATAGAAAAGACCTAGAAAATGCTACTAGTTTTTTCAGCTCAGCTAACGTCATTGGAGCTAGCAATTTGAGCACTGTTTATAAGGGTCAATTAGGAGATGGCAAGACAGTGGCAATAAAAATACTGAACTTGGAACATTTTTCTGCAGAATCTGACAAGCTTTTCAAAAGAGAAATAAGCATCTTGAGCCAACTAAGGCATAGGAATTTGGTGAAGGTAATGGGGTATGCTTGGGAGAGTGGGAAAATAAAGGCTCTAGTTTTGGAGTACATGGAGAATGGGAATTTGGATAGCATAATACATAAAGAAGAAGGGATAATGAATCAAAGTAGATGGACATTATGTGAAAGGCTCAATGTTTTCATTTCTGTAGCTGAAGGATTGGATTACTTGCACTCTGGTTATGATATTCCAATTGTGCATTGTGATTTAAAGCCTTCTAATATTCTTTTGGATGGAGATTTTGTGGCCCATGTGAGTGATTTTGGGACTGCTAGAATGCTTGGTCTCCATTTGCAAGATGCAGCTTCTGTGTCCTCATCAACAGGTTTCCAAGGCACCTTTGGTTATATGGCTCCAGAGTTTGCGTACATGAGGAAAGTAACGACCAAATTTGACGTGTTCAGCTTTGGCATAGTAGTAATGGAGTTTCTAACAAGAAGGAGACCCACAGGGCTCGCAGAAGAGGATGGCTTGCACTTAAGTCTACGAGAAATAGTGCAGAAAGCACTTTCAAAAATTGCAACAAAGCAACATGTTCTTCATCAACTTCTGGATCCTTTGCTGTTTGACAATGATCATCAATATGAAGATGTCTTAGTGGATCTCTTGAAACTATCATTGACTTGTACCCTCCCTGATCCTCAAGATCGTCCTACTATGAATCAAGTGTTGTCTCTCTTGATCATGCTCAAGAAGAATATATCATAG 3516 0.3894 MMPPKISLNILIIVLSISISTIFSNIAESSSLLQVEIEALKAFKSSITHDPNGALADWVDTSHHCNWSGIACDPSSQHVISLTQVGKKLQGKISPFLGNLSGLQVLDLTSNSFSGFIPPQLSFCSQLTQLLLFENTLSGPIPTELGNLKSLQYLDLGSNNLNGSLPESLFNCTSLLGIAFNSNNLNGEIPSNIGNLVNVTQIAGFTNQFVESIPPSIGKLRDLQSLDFSQNQLSGKIPREIGNLGNLEYLVLFENSLVGNIPSELGECMKLVNLELYTNQLSGSIPTELGNLVLLETLRIYDNNFTSTIPSSIFQLKSLTHLGLSENRLEGIISPEIGSLRSLKVLTLHSNKFTGQIPSAITELTNLTYLSMSQNLLSGKLPSSIGLLHNLKFLVLNGNLFHGHIPPSITNCTGMVNVSLSFNSLSGNIPEGFSRMPNLTFLSFSSNKMSGEIPDDLFNCSNLLTLSLGENNFSGMIKPTIKNLLNLKTLQLNLNSLTGPIPLEIGNLNQLVTLTLSHNRFSGQIPLELSNLSLLQGLFLQGNALEGTIPNQLFELNQLTELNLHQNNLVGQIPKAFSKFKMLSHLDLHGNMFNGTIPRELSQLSQILMLDLSKNHLTGSIPGDVIAHFRDMQLNLNLSHNHFIGVIPEELGMLEMIQDIDVSNNNLSGVIPKTLSGCRNLYNLDLSGNSISGPIPAKAFNRMDLLQSLNLSRNQLDGEIPETLSKLDHLISLDLSHNNLKGSISDNFANLSNLKLLNLSFNQLEGQVPSSGIFSHIEASALIGNPALCGTKFLMPCRETRRSHSLSKKSISIIASLGSVVVLLILVLVILFLIQRARLRRSNKPENPGVPSYTSALTLERFDRKDLENATSFFSSANVIGASNLSTVYKGQLGDGKTVAIKILNLEHFSAESDKLFKREISILSQLRHRNLVKVMGYAWESGKIKALVLEYMENGNLDSIIHKEEGIMNQSRWTLCERLNVFISVAEGLDYLHSGYDIPIVHCDLKPSNILLDGDFVAHVSDFGTARMLGLHLQDAASVSSSTGFQGTFGYMAPEFAYMRKVTTKFDVFSFGIVVMEFLTRRRPTGLAEEDGLHLSLREIVQKALSKIATKQHVLHQLLDPLLFDNDHQYEDVLVDLLKLSLTCTLPDPQDRPTMNQVLSLLIMLKKNIS 1171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0943 1171 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 33 187 - -
Lele13g0943 1171 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 953 1171 - -
Lele13g0943 1171 Pfam Leucine rich repeat N-terminal domain 36 73 IPR013210 -
Lele13g0943 1171 FunFam Inactive leucine-rich repeat receptor-like protein kinase 519 800 - -
Lele13g0943 1171 FunFam Leucine-rich receptor-like protein kinase family protein 309 406 - -
Lele13g0943 1171 SMART LRR_typ_2 340 364 IPR003591 -
Lele13g0943 1171 SMART LRR_typ_2 751 776 IPR003591 -
Lele13g0943 1171 SMART LRR_typ_2 388 412 IPR003591 -
Lele13g0943 1171 SMART LRR_typ_2 556 579 IPR003591 -
Lele13g0943 1171 SMART LRR_typ_2 508 532 IPR003591 -
Lele13g0943 1171 SMART LRR_typ_2 100 124 IPR003591 -
Lele13g0943 1171 SMART LRR_typ_2 292 316 IPR003591 -
Lele13g0943 1171 SMART LRR_typ_2 220 243 IPR003591 -
Lele13g0943 1171 SMART LRR_typ_2 654 677 IPR003591 -
Lele13g0943 1171 SMART LRR_typ_2 244 268 IPR003591 -
Lele13g0943 1171 SMART LRR_typ_2 148 172 IPR003591 -
Lele13g0943 1171 SMART LRR_typ_2 580 604 IPR003591 -
Lele13g0943 1171 SMART LRR_typ_2 703 726 IPR003591 -
Lele13g0943 1171 SMART LRR_typ_2 727 750 IPR003591 -
Lele13g0943 1171 SMART LRR_typ_2 436 460 IPR003591 -
Lele13g0943 1171 Gene3D Ribonuclease Inhibitor 380 478 IPR032675 -
Lele13g0943 1171 Gene3D Ribonuclease Inhibitor 272 379 IPR032675 -
Lele13g0943 1171 SUPERFAMILY RNI-like 85 402 - -
Lele13g0943 1171 Gene3D Ribonuclease Inhibitor 479 633 IPR032675 -
Lele13g0943 1171 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 558 1163 - -
Lele13g0943 1171 Gene3D Ribonuclease Inhibitor 34 195 IPR032675 -
Lele13g0943 1171 PRINTS Leucine-rich repeat signature 730 743 - -
Lele13g0943 1171 PRINTS Leucine-rich repeat signature 751 764 - -
Lele13g0943 1171 Gene3D Ribonuclease Inhibitor 196 271 IPR032675 -
Lele13g0943 1171 SUPERFAMILY L domain-like 375 475 - -
Lele13g0943 1171 FunFam Probable leucine-rich repeat receptor-like protein kinase At5g63930 188 287 - -
Lele13g0943 1171 CDD STKc_IRAK 880 1163 - -
Lele13g0943 1171 SUPERFAMILY L domain-like 478 800 - -
Lele13g0943 1171 Gene3D Phosphorylase Kinase; domain 1 838 952 - -
Lele13g0943 1171 Gene3D Transferase(Phosphotransferase) domain 1 953 1170 - -
Lele13g0943 1171 SUPERFAMILY Protein kinase-like (PK-like) 850 1165 IPR011009 -
Lele13g0943 1171 Pfam Leucine rich repeat 341 400 IPR001611 GO:0005515
Lele13g0943 1171 Pfam Leucine rich repeat 635 691 IPR001611 GO:0005515
Lele13g0943 1171 Pfam Leucine rich repeat 706 764 IPR001611 GO:0005515
Lele13g0943 1171 ProSiteProfiles Protein kinase domain profile. 874 1166 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0943 1171 SMART LRR_sd22_2 364 389 - -
Lele13g0943 1171 SMART LRR_sd22_2 220 246 - -
Lele13g0943 1171 SMART LRR_sd22_2 727 750 - -
Lele13g0943 1171 SMART LRR_sd22_2 148 180 - -
Lele13g0943 1171 Pfam Protein kinase domain 877 1161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0943 1171 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1001 1013 IPR008271 GO:0004672|GO:0006468
Lele13g0943 1171 Pfam Leucine Rich Repeat 103 124 IPR001611 GO:0005515
Lele13g0943 1171 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 837 952 - -
Lele13g0943 1171 FunFam Leucine-rich repeat receptor protein kinase EMS1 407 494 - -
Lele13g0943 1171 Gene3D Ribonuclease Inhibitor 634 805 IPR032675 -
Lele13g0943 1171 SMART serkin_6 874 1165 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0943 Lele-ChrLele13 20713867 20717708 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0943 15 1167 Receptor kinase-like Gene Family AT5G46330 52.155 0.0 1130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lele13g0943 Pkinase 3.8e-44 CL0016