Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0935 ATGGAGAAGGAGCCTCTGCTCCCATATGCCAGTTCCAGAAAGAAGCCTCCGCCACCACCATCGCCGCTATGCCCTTTACCGGAGCACGACGAGGTTTTCCTTCCTCTTACCCCTTCTGCGATTAAGGACCGTCTTATCTTTGGCCCTTCTTCCCCAACAGGTTCTTCCCCCTTGCTTGAGGCCTTGACACTTACCCTTAACTCGCCAAGACCCTCGTCTTCTTCACCGGACCCTCAAGATACACAACCCCAACAGTCTTGGCTTATTGATCCCAATTACCCAAGTCACAAAACTAATCTACATCGCTCCAAAACTGCCCCGGCTATGGCGGTAATCAGCGATGTTAATCACCATAGCCCTGTTGTTAGACCCCAATTTAGTTCTCAATCGATTGTTCGTCAAGCTGTTCTTCTTCTTATAGTGTATTTGTTGTTGGGGGTGGTTATTTATTGGTTCAATCGTCATAATTTCTCAGCAACTGAGACTCACCCTGTTGTGGACGCTTTATATTTTTGTATAGTGACAATGTGTACAATAGGCTATGGTGATATTACTCCAAATAGTACAACAACAAAACTGTTTTCTATATTGTTTGTACTGGTGGGTTTTGGGTTTATTGACATTCTGCTCAGTGGGATGGTCAGTTACGTTCTTGATTTGCAAGAGAATCACTTGCTCCAAGCGGTGAAGACCAAGGTTGAAATTGAGAAGGATGCCAGATCATATATAATTGATGTGAAGAAAGGGAGAATGAGGATCAGGTTGAAGGTGTCTTTGGCATTGGGGGTTGTTGTCCTTTGCATTGGAATTGGTTTTGGGGTTATGCATTTTGTGGAAGGGCTTGGGTTGTTGGATTCTTTTTATCTTTCAGTTATGTCAGTAACAACTGTTGGGTATGGTGACCATGCATTCAAGACATTGCCTGGTCGTATCTTTGCCGCAATATGGTTGCTTGTATCGACGCTTGCAGTGGCCCGGGCGTTCCTATATTTGGCCGAGTCAAGAGTGGATAAGCGGCATAGGAGGATGGCAAAGTGGATTCTTGGTCAGGATATGACTATCTCTGAGTTTCTGGCTGCAGATATAGACAATAATGGCTTTGTGAGTAAATCAGAATATGTTATTTACAAGCTGAAGGAGATGGGAAAAGTTTCAGATAAAGACATTTTGCAGATTAGTGAGACATTTGATAAGATAGATTCCGGCAACTTTGGAAAATTAACTCTGGCTGATCTTATGGAGGGTCAAAATTGA 1254 0.4362 MEKEPLLPYASSRKKPPPPPSPLCPLPEHDEVFLPLTPSAIKDRLIFGPSSPTGSSPLLEALTLTLNSPRPSSSSPDPQDTQPQQSWLIDPNYPSHKTNLHRSKTAPAMAVISDVNHHSPVVRPQFSSQSIVRQAVLLLIVYLLLGVVIYWFNRHNFSATETHPVVDALYFCIVTMCTIGYGDITPNSTTTKLFSILFVLVGFGFIDILLSGMVSYVLDLQENHLLQAVKTKVEIEKDARSYIIDVKKGRMRIRLKVSLALGVVVLCIGIGFGVMHFVEGLGLLDSFYLSVMSVTTVGYGDHAFKTLPGRIFAAIWLLVSTLAVARAFLYLAESRVDKRHRRMAKWILGQDMTISEFLAADIDNNGFVSKSEYVIYKLKEMGKVSDKDILQISETFDKIDSGNFGKLTLADLMEGQN 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0935 417 FunFam Two-pore potassium channel 5 121 230 - -
Lele13g0935 417 MobiDBLite consensus disorder prediction 1 30 - -
Lele13g0935 417 SUPERFAMILY EF-hand 355 414 IPR011992 -
Lele13g0935 417 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 136 391 IPR003280 GO:0005267|GO:0016020|GO:0071805
Lele13g0935 417 MobiDBLite consensus disorder prediction 11 26 - -
Lele13g0935 417 Gene3D - 128 231 - -
Lele13g0935 417 Gene3D - 262 325 - -
Lele13g0935 417 ProSitePatterns EF-hand calcium-binding domain. 361 373 IPR018247 -
Lele13g0935 417 Pfam Ion channel 138 217 IPR013099 -
Lele13g0935 417 Pfam Ion channel 263 332 IPR013099 -
Lele13g0935 417 MobiDBLite consensus disorder prediction 66 92 - -
Lele13g0935 417 PRINTS Two pore domain K+ channel signature 295 304 IPR003280 GO:0005267|GO:0016020|GO:0071805
Lele13g0935 417 PRINTS Two pore domain K+ channel signature 174 202 IPR003280 GO:0005267|GO:0016020|GO:0071805
Lele13g0935 417 SUPERFAMILY Voltage-gated potassium channels 128 217 - -
Lele13g0935 417 Gene3D - 326 417 - -
Lele13g0935 417 FunFam Two-pore potassium channel 3 240 354 - -
Lele13g0935 417 SUPERFAMILY Voltage-gated potassium channels 247 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0935 Lele-ChrLele13 20673551 20677509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0935 4 415 Ion Channels AT4G18160 62.731 1.58e-179 506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0935 13 20673551 20677509 Lele16g1554 16 9013043 9020006 hybridization