Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele13g0925 | ATGTCATGGCCCTGGACCTCTGGAAGGGAGAAGGAGGATAGTATTTCACTGGGAGTTGCATCTGTTCATGCTACATTGAGTCTAATGAATGAAGTTGTGTATGGACTTAAGGGCGATGCAATGAAGCAGTCTTTTGACATTTCGGCTTCTGGTCCAACCGAGATTCCATCTATAAATATTCCCAAAGAAGTGGGACGCCAAGCTTGGGAGGTTTCATCTGGATCTGATGCCTGCCCTACTTCATCAGATGCTAGTCTTTTTTCTAGCTCATTACCTGTTTTGCCACATGAAAAGTTGAACTTGAACGACACCAAAAATGAGTATCAGTCTGTGGATGACATCTCATCTGGTTTTAAAAAGCTCCACCAAGATTTAGAGGTTAATGAATCACTTGAAGATGCAAATATTCATGCACTTGGAACAACGCTTCCAGATGATGAGGATGAGCTTTTAGCTGGCATAACAGATGATTTTGACCTGAGTGGTTTGCCCGGTTCCCTGGAGGACTTGGAAGATTATGATCTTTTTGGTGGTGGAGGTATGGAAATGGAAAATGATCCTCATGAAAGCATTACAGTGGGGATTTCAAAATTAAGTTTCTCTGATGGTACAATGGGCAATGGTTTGCCCCATTATTCTTTTCCTAATGGTGTTGGAACTGTTGCTGGGGAACATCCGTATGGGGAACATCCTTCTCGAACATTATTTGTTCGAAATATTAACAGTAATGTAGAGGACTCAGAATTGAGAGCCCTTTTTGAGCAATATGGTGATATTAGAACCCTCTATACTGCATGTAAACATCGGGGGTTTGTAATGATATCCTACTATGACATCCGTGCTGCTCGAACAGCTATGCGTGCATTACAAAACAAACCACTGCGGCGGAGGAAACTTGACATTCATTTCTCAATACCAAAGGATAATCCATCGGACAAGGATATAAATCAAGGAACCTTGGTGGCTTTTAATTTGGATCCATCAGTTTCAAATGAAGACCTTCGACAAATATTTGGGGCTTATGGCGAGGTTAAAGAGATAAGGGAAACTCCTCACAAGAGGCATCATAAATTTGTTGAATTTTATGATGTTAGGGCAGCAGAAGCGGCACTTAAATCATTGAACAGGAGTGACATAGCGGGTAAACGTATAAAGCTGGAACCTAGTCGTCCTGGTGGAGCTCGTAGGAATTTGATGCTCCAACTAAATCCAGATCTTGATCAAGATGAATCTCAGAACTATCGACATCAAGTGGGTTCACCTGTAGCCAACTCTCCACCAGGTAAGTGGTTGCAGTTTAACAGCCCCATTGAACATAAGCCAATGCAATCTATCAGTAATTCTCCTGGTTCTAGGATTATGAGCGCAACAACTGGCAACCGTTTACCAGGATTAGCTTCAATCTTGCAACCTCAAGGATCTAACTCTATAAAAGGTGCAGCTATTGGTAAGGACCTAGGAAGGAGTAGTCATGGAGATCACGTGTTTAGTAGTACCAATGCATCACATGGAGCCACATTTCAATCTCACTCACTTCCAGAACCAACATTCGGCCAATATCATCAAGCTTTGTCCTCTTTTGGTCCATCAACTTCAAATGGATCTTCTGTGGAAACCTTGTCTGGGCCTCAGTTTCTTTGGGGAAATTCAAGCTTATACTCTGAGCACACTAAACCTTCACCTTGGCCTAGACCATCTGTAGGGCCTCCATTCACATCGAATGGAAAGGGTCATGGCTTTCCATACTCTGGTCAGAATGGCTCCTTTGTTGGATCTTCCCAGCATCATCTTCATCATCATGTAGGCTCTGCTCCATCAGGTGTTCCATTTGAGAGGCGCTTTGGTTTTCTTCCTGAATCTCCTGAAACCTCATTTATGAATCATGTTGGTTATGGAGGCTTAAATGTGGGACACAATGATGGAAACTACATGGTTAACATGGGTGGATCTGTTAATGCTGGCATTACTATGCCGAGGAATATGTCTGAAAATGTTCAATCAAAGTTCAGAATGAGATCTTCTCCAAGGCTTAGCCCTGTGTTTCTGGGTAATGGTCCTTACTCTGGGGTTCCACTCACTGCCCTGGACGGTTTGACTGACCGTGGAAGGAGTAGACGGCTAGAGAATAATGGTAACCAAGTTGATAGCAAAAAGCAATTTGTGCTTGACTTGGATAAGATTAGAAGTGGTGAAGATGCAAGGACTACTTTAATGATAAAGAATATCCCAAATAAGTACACTTCAAAAATGCTACTAGCTGCCATTGACGAAAATCACAGGGGCACCTATGATTTCCTCTATCTGCCTATTGATTTTAAGAATAAGTGTAATGTGGGTTATGCATTTATCAACATGCTGTCACCCTCTCTCGTCATTCCATTCTATGAGACATTCAATGGAAAGAAGTGGGAGAAGTTTAATAGTGAGAAAGTTGCTTCTTTGGCGTATGCCCGAATCCAAGGAAAGGTTGCCCTTGTGAGCCACTTCCAGAATTCAAGTTTGATGAATGAAGACAAGCGATGCCGCCCTATTCTCTTCCACTCGGAGGGTCCTGAAGCCGGTGATCAGATCTTACAAGAACATCTTCCCTCCAACAATCTCAACATCCAGGTCCTCAGGTCAAATGATTCACATTTGAATGACTCTCCTGGAAGCCCCCTCAATGATAACCCTCCTGTGAACTTGGAGACAAGTTAA | 2697 | 0.4271 | MSWPWTSGREKEDSISLGVASVHATLSLMNEVVYGLKGDAMKQSFDISASGPTEIPSINIPKEVGRQAWEVSSGSDACPTSSDASLFSSSLPVLPHEKLNLNDTKNEYQSVDDISSGFKKLHQDLEVNESLEDANIHALGTTLPDDEDELLAGITDDFDLSGLPGSLEDLEDYDLFGGGGMEMENDPHESITVGISKLSFSDGTMGNGLPHYSFPNGVGTVAGEHPYGEHPSRTLFVRNINSNVEDSELRALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRALQNKPLRRRKLDIHFSIPKDNPSDKDINQGTLVAFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFVEFYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRNLMLQLNPDLDQDESQNYRHQVGSPVANSPPGKWLQFNSPIEHKPMQSISNSPGSRIMSATTGNRLPGLASILQPQGSNSIKGAAIGKDLGRSSHGDHVFSSTNASHGATFQSHSLPEPTFGQYHQALSSFGPSTSNGSSVETLSGPQFLWGNSSLYSEHTKPSPWPRPSVGPPFTSNGKGHGFPYSGQNGSFVGSSQHHLHHHVGSAPSGVPFERRFGFLPESPETSFMNHVGYGGLNVGHNDGNYMVNMGGSVNAGITMPRNMSENVQSKFRMRSSPRLSPVFLGNGPYSGVPLTALDGLTDRGRSRRLENNGNQVDSKKQFVLDLDKIRSGEDARTTLMIKNIPNKYTSKMLLAAIDENHRGTYDFLYLPIDFKNKCNVGYAFINMLSPSLVIPFYETFNGKKWEKFNSEKVASLAYARIQGKVALVSHFQNSSLMNEDKRCRPILFHSEGPEAGDQILQEHLPSNNLNIQVLRSNDSHLNDSPGSPLNDNPPVNLETS | 898 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele13g0925 | 898 | Pfam | RNA recognition motif 2 | 734 | 830 | IPR007201 | - | |
Lele13g0925 | 898 | CDD | RRM2_MEI2_like | 317 | 387 | - | - | |
Lele13g0925 | 898 | FunFam | MEI2-like protein 5 isoform 2 | 222 | 316 | - | - | |
Lele13g0925 | 898 | FunFam | Protein MEI2-like 1 | 317 | 412 | - | - | |
Lele13g0925 | 898 | CDD | RRM3_MEI2_like | 737 | 822 | IPR034454 | - | |
Lele13g0925 | 898 | MobiDBLite | consensus disorder prediction | 556 | 605 | - | - | |
Lele13g0925 | 898 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 233 | 306 | IPR000504 | GO:0003723 | |
Lele13g0925 | 898 | PANTHER | RNA RECOGNITION MOTIF-CONTAINING | 82 | 852 | - | - | |
Lele13g0925 | 898 | SMART | rrm1_1 | 319 | 387 | IPR000504 | GO:0003723 | |
Lele13g0925 | 898 | SMART | rrm1_1 | 234 | 302 | IPR000504 | GO:0003723 | |
Lele13g0925 | 898 | SMART | rrm1_1 | 736 | 812 | IPR000504 | GO:0003723 | |
Lele13g0925 | 898 | MobiDBLite | consensus disorder prediction | 875 | 898 | - | - | |
Lele13g0925 | 898 | SUPERFAMILY | RNA-binding domain, RBD | 230 | 392 | IPR035979 | GO:0003676 | |
Lele13g0925 | 898 | Gene3D | - | 222 | 318 | IPR012677 | - | |
Lele13g0925 | 898 | SUPERFAMILY | RNA-binding domain, RBD | 736 | 820 | IPR035979 | GO:0003676 | |
Lele13g0925 | 898 | CDD | RRM1_MEI2_like | 232 | 308 | IPR034453 | - | |
Lele13g0925 | 898 | MobiDBLite | consensus disorder prediction | 578 | 593 | - | - | |
Lele13g0925 | 898 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 235 | 299 | IPR000504 | GO:0003723 | |
Lele13g0925 | 898 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 324 | 385 | IPR000504 | GO:0003723 | |
Lele13g0925 | 898 | Gene3D | - | 319 | 414 | IPR012677 | - | |
Lele13g0925 | 898 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 318 | 391 | IPR000504 | GO:0003723 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele13g0925 | Lele-ChrLele13 | 20618561 | 20624238 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele13g0925 | 228 | 426 | Eukaryotic Initiation Factors Gene Family | AT1G71770 | 25.561 | 5.50e-06 | 48.1 |