LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele13g0913	ATGAACCCACTATCTCTGACGTTCACAGCATGCAAGGAGTGGTATTGCTTCTTTAAGGTTTTATTTCAGGGTGGCGATGCAGGCGTTGGAGGAGCCCTGGCTTTTTGTGTAGTGGAAAGCCTCGTTCAGTACGGTTCTAGGGTTGACGGATCCTTTTGGTTGGCGGAGTGCGGAGGCCGCTGCGTTTTGCATGAGCTCACGGGCGTATTTGCTGGCGTCGATGCCTTTTTTGAACCAGCCTCCGACGCCGACAGCATTCCGACGGGCGCAGATGAAGTGGGAGTCATCGCCTTGCGGCTTTATAGGGTTGGGCTTTGGGTAGTAGGTTGCTCCGACTTGCGGAAAGTACTCTCGGCGAGAGGAAGCGAGGGAAAGAGCGAAACTGCAAAAGCATTTCAGTTCGTACCAACAAAGCGAGAGAGAATGGCGGTGGACAAACCCCCAAAGCCTACCGTTACAGGCAATCAAATCAATGGCGGCGATGAGAATGTGGAGGAGCAAGGAGAGATCGTTCTAGATGATGATTCTGCGTCTTCCAAGCTACTGACTGCGATGGTCCGACAGCCTCATCCGCTCGAGCATTCTTGGACCTTCTGGTTCGATAACCCTTCGGCCAAGTCCAAGCAAGCCGCCTGGGGAAGCTCTATCCGACCCGTTTATACGTTTGCAACTGTGGAGGAGTTTTGGAGTATGTACAACAACATACATCATCCAAGCAAGTTGGCTGTGGGAGCAGACTTCCATTGTTTTAAATACAAAATTGAGCCAAAGTGGGAGGACCCCATTTGTGCTAATGGTGGAAAATGGACTGTTACCTTTTCCAGGGGAAAATCAGATACATGTTGGTTATATACGTTGCTGGCACTGATTGGAGAACAGTTTGACCACGGAGATGAAATTTGTGGCGCTGTCGTAAATGTCAGAAATAGGCAAGAAAAAATTGCTATTTGGACTAAAAACGCTTCAAATGAAGCTGCTCAGGTGAGCATTGGCAAACAGTGGAAAGAGTTTCTTGATTACAATGATCAAATTGGCTTCATCTTCCATGAGGATGCTAAGAAGCATGACAGAGCTGCTAAAAATAAATATTTCATATGA	1098	0.4809	MNPLSLTFTACKEWYCFFKVLFQGGDAGVGGALAFCVVESLVQYGSRVDGSFWLAECGGRCVLHELTGVFAGVDAFFEPASDADSIPTGADEVGVIALRLYRVGLWVVGCSDLRKVLSARGSEGKSETAKAFQFVPTKRERMAVDKPPKPTVTGNQINGGDENVEEQGEIVLDDDSASSKLLTAMVRQPHPLEHSWTFWFDNPSAKSKQAAWGSSIRPVYTFATVEEFWSMYNNIHHPSKLAVGADFHCFKYKIEPKWEDPICANGGKWTVTFSRGKSDTCWLYTLLALIGEQFDHGDEICGAVVNVRNRQEKIAIWTKNASNEAAQVSIGKQWKEFLDYNDQIGFIFHEDAKKHDRAAKNKYFI	365

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele13g0913	365	FunFam	Eukaryotic translation initiation factor 4E	182	365	-	-
	Lele13g0913	365	Pfam	Eukaryotic initiation factor 4E	191	343	IPR001040	GO:0003723\|GO:0003743\|GO:0006413
	Lele13g0913	365	ProSitePatterns	Eukaryotic initiation factor 4E signature.	246	269	IPR019770	GO:0003723\|GO:0003743\|GO:0005737\|GO:0006413
	Lele13g0913	365	PANTHER	EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED	158	354	IPR001040	GO:0003723\|GO:0003743\|GO:0006413
	Lele13g0913	365	SUPERFAMILY	eIF4e-like	186	360	IPR023398	-
	Lele13g0913	365	Gene3D	RNA Cap, Translation Initiation Factor Eif4e	182	365	IPR023398	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele13g0913	Lele-ChrLele13	20522153	20525363	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele13g0913	186	363	Eukaryotic Initiation Factors Gene Family	AT4G18040	80.899	3.74e-109	317