Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0904 ATGATGATTGTGATAGAATATCATCCCAAGGGAGATCTTCGTGCATTCTTGAAAAGAAAAGGAGCCTTGAGACCAACAGCAGCAGTGAGATTTGCTCTTGATATTGCTAGGGGAATGAACTATTTGCATGAAAATAAGCCATCGCCAATAATTCATCGTGATCTTGAGCCCTCTAATATATTGCGGGATGATCCAGGACGCCTAAAAGTTGCAGACTTTGGGGTCAGCAAATTGCTGGCAGTTAAAGAAGACAGGCCTCTAACCTCCCAAGAGACTTCTTGCCGCTATGTGGATCCAGAGGTTTTCAATCAAGAAGAATATGACACCAAAGTGGATGTTTTCTCATTTGCTTTGATTTTGCAAGAGATGATAGAGGGCTGCCCCCCATTTTTTACAAAGCAAGATGATGAGGTTCCCAAGGTACATGCTGCAAAAGAGCGTCCTCCTTTCAGCGCTCCAGCCAAGTGTTGTGCCCATGGACTGAGAGCATTGATTGAAGAGTGCTGGAATGAGAATCCAGCAAAGAGGCCAACATTTAGGCAAATAATAACAAGGCTTGAATCCATGTACTGCACACTTGCTCATAAAAAACGATGGAAGGTTAGGCCACTGATGAAATGCTTCCAGAATCTGGAAGCCATGTTGAAGAGAGATCACTCAAATCTAAGCAGTCCGAGCGGCTAA 684 0.4386 MMIVIEYHPKGDLRAFLKRKGALRPTAAVRFALDIARGMNYLHENKPSPIIHRDLEPSNILRDDPGRLKVADFGVSKLLAVKEDRPLTSQETSCRYVDPEVFNQEEYDTKVDVFSFALILQEMIEGCPPFFTKQDDEVPKVHAAKERPPFSAPAKCCAHGLRALIEECWNENPAKRPTFRQIITRLESMYCTLAHKKRWKVRPLMKCFQNLEAMLKRDHSNLSSPSG 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0904 227 FunFam Integrin-linked protein kinase family 9 202 - -
Lele13g0904 227 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 190 - -
Lele13g0904 227 SUPERFAMILY Protein kinase-like (PK-like) 2 210 IPR011009 -
Lele13g0904 227 PIRSF ILK 1 210 - -
Lele13g0904 227 ProSiteProfiles Protein kinase domain profile. 1 190 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0904 227 PRINTS Tyrosine kinase catalytic domain signature 111 133 IPR001245 GO:0004672|GO:0006468
Lele13g0904 227 PRINTS Tyrosine kinase catalytic domain signature 44 62 IPR001245 GO:0004672|GO:0006468
Lele13g0904 227 PRINTS Tyrosine kinase catalytic domain signature 5 18 IPR001245 GO:0004672|GO:0006468
Lele13g0904 227 PRINTS Tyrosine kinase catalytic domain signature 157 179 IPR001245 GO:0004672|GO:0006468
Lele13g0904 227 Pfam Protein tyrosine and serine/threonine kinase 1 186 IPR001245 GO:0004672|GO:0006468
Lele13g0904 227 Gene3D Transferase(Phosphotransferase) domain 1 1 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0904 Lele-ChrLele13 20455213 20457775 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0904 1 208 MAP Kinase Kinase Kinase AT4G18950 67.308 1.19e-98 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Lele13g0904 PK_Tyr_Ser-Thr 1.7e-39 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0904 13 20455213 20457775 Lele15g1568 15 9286145 9291063 hybridization