Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0903 ATGGACGCGCGTAATAGTCGCGTAAGGTTTACGCTGGGGAGGCAGTCATTGCTGGCCCCGGAAAGGCATAGCGACGAATCGGAGCTGCATCAGGAGGGTGATGGCCTTGAGGGTATGGATCCTGGATTTAGGCTGATGTTTTTGGCCATTGAAGGCGATCTGGATGGTATTCGTGAGCTAACAAATACGGGGGTTAGTGTGAATTATAGAGATATTGATAATCGCACGCCTCTTCATGTTGCGGCTTGTCAGGGATTGACTGATGTGGTGGCTCTGCTGCTCGAAAAAGGGGCTGTGGTTGACCCACAAGATAGTTGGGGGAGCACAACCTTTTCTTTTAAAGAAAATTTGTACATGTATATTGAGTACAAAGAGCAAGTGCATATGATCAATTCACCGCCTGAGAACTTGCCTCTTGCAGATGCTATACATGGTAAAAACAACGATGTGATCAAATTATTGGAGAAGCATGGAGCAAAGCCTGTGGGAACTTTCTCTAGTGCATTGTGGCGTGGAACAGAGGTTGCCGTGAAAAAGCTTGGGGATGATGTCATTACTAATGAGGAGAAAGTGTGGATTACTTCAAAGCTTTGTCATTACTGA 603 0.461 MDARNSRVRFTLGRQSLLAPERHSDESELHQEGDGLEGMDPGFRLMFLAIEGDLDGIRELTNTGVSVNYRDIDNRTPLHVAACQGLTDVVALLLEKGAVVDPQDSWGSTTFSFKENLYMYIEYKEQVHMINSPPENLPLADAIHGKNNDVIKLLEKHGAKPVGTFSSALWRGTEVAVKKLGDDVITNEEKVWITSKLCHY 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0903 200 Gene3D - 16 170 IPR036770 -
Lele13g0903 200 SMART ANK_2a 73 102 IPR002110 GO:0005515
Lele13g0903 200 SMART ANK_2a 134 163 IPR002110 GO:0005515
Lele13g0903 200 SMART ANK_2a 41 69 IPR002110 GO:0005515
Lele13g0903 200 ProSiteProfiles Ankyrin repeat region circular profile. 73 104 - -
Lele13g0903 200 SUPERFAMILY Ankyrin repeat 44 164 IPR036770 -
Lele13g0903 200 Pfam Ankyrin repeats (3 copies) 44 103 IPR002110 GO:0005515
Lele13g0903 200 ProSiteProfiles Ankyrin repeat profile. 73 105 IPR002110 GO:0005515
Lele13g0903 200 PANTHER ANKYRIN REPEAT CONTAINING 64 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0903 Lele-ChrLele13 20452611 20455077 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0903 5 191 MAP Kinase Kinase Kinase AT3G58760 42.035 1.14e-45 153