Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0874 ATGTTGGCACTGTTGTTTAACCCAGAGACCAAGCGACAGTGTCTGCCATGAAATTCCAAAAGGGGTTGGTTGCTTTTTGACGCAAAACAAAGCAGAGTAACTAGAAACTCAGCAGTGAAGATCCCAGTTAAAAGTTTCAGACTTTTTCGGGTCCTGCTTGATTTGATTTCTTGTTTCATGGAAGATGTGAAAAGAGCTGTTTGGTTCGTCTTCTTTCTGTGGAATTGGTTGGGTGCTGCTGGTAAAGCTGACAGTCTTCTTTCTCCAAAGGGTGTGAACTATGAAGTTTCTGCTTTGATGTCAATGAAGAATAAAATGAAGGACGAATTGCGTGTTATGGATGGTTGGGATATTAATTCGGTTGATCCTTGTACTTGGAACATGGTCGGTTGCTCTGCTGAAGGCTATGTTATTTCCCTGGACATGGCCAGTATGGGTTTATCTGGAACGCTTTCTCCAGGAATTGGAAATTTGAGCCACCTCCGAACACTGTTGTTGCAGAACAATCAATTATCTGGACCTGTTCCTGCTGAGATAGGAAAGCTTTTGGAGCTTCAGACTCTTGACCTTTCTGGTAATCAGTTTGTTGGTGAAATCCCTAGTTCTCTGGGATTTTTGACTCGTCTTAGTTACTTGCGGCTTAGTAGAAATAAACTATCTGGGCAGATTCCTCAACTCGTTGCAAATCTCACAGGCCTTTCATTCTTGGACTTGTCATTCAATAATCTCAGTGGTTCCATTCCAAAAATTTTAGCAAAAGGTTACAGTATTTCAGGAAACAACTTCCTTTGTGCGTCTTCATCAGGACAAATTTGTATGGGTGTTTCAAATCCACTAAATGACACTGGTTCCTCACTGGAAGTTGGTAGTCATCACCATCGGGTGCTTTCGGTTGCTATTGGCATTACTTGTACATTTCTAATTTCAGCAATGCTGCTTATCTGCTGTGTGCATTGGTACAGATCACGCATCCTGTATACATCTTATGTAAAGGAAGATTATGAATTTGACATTGGTCATTTGAGGAGGTTTTCTTTCCGTGAATTGCAATCTGCTACTAGCAATTTCAGTCCAAAAAACATCCTAGGACAAGGTGGATTTGGTGTTGTGTACAAAGGATGTCTTCCAAATAAAATGACGGTGGCGGTGAAGAGGCTGAAAGATCCCAATTACACTGGAGAAGTACAATTTCAAACTGAAGTTGAGATGATTGGCTTGGCAGTTCATCGGAATCTCTTACGTCTCTATGGATTTTGTATGACATCTCATGAGAGGCTACTTGTTTACCCATACATGCCTAATGGCAGTGTTGCTGATCGCTTAAGAGACACTTGTCGCGAAAAGCCATCATTGGACTGGAATAGGCGAATGCGAATTGCTCTTGGGGCAGCTCGCGGGCTTCTATATTTACATGAGCAGTGTAACCCAAGAATTATCCACAGGGACGTTAAGGCTGCAAACATTTTGCTAGATGAAAGTTTTGAAGCTGTGGTGGGGGATTTTGGTCTTGCTAAGCTCTTGGATCAAAGAGATTCTCATGTCACTACTGCAGTGAGAGGCACAGTAGGACACATTGCCCCTGAATATCTCTCCACTGGGCAGTCTTCTGAGAAAACTGATGTTTTCGGATTTGGCATATTACTTTTGGAGCTCATCACAGGGCAGAAGGCATTGGATGCTGGAAATGGTCAAATCCAGAAGGGAATGATTCTTGATTGGGTAATTTGCTTCAGTCTTGTCTTTTTTGAGCAACAACTTGAACTCCTACAGGTCAAAACCTTATTTGAGGAGAAGAGATTGGAGGTGCTAGTTGATAGGGATCTGAGGGGACGATTTGATCCAATAGAGTTGGAACAAGCAGTGAAGTTGTCTTTGCAATGTACTCAATCACATCCCAGTCTCCGGCCGAAGATGTCGGAAATCTTGAGGATCCTAGAAGGCCTAGTCGGACAGGGGCAGCCAGAGGAGGAGTCACACGGTGGAGGTAACCTTTATGACGAAAGGAATTGCAGTTTCTCCAGAAATTACAGTGATGGGCATGATGAACCTTCATTTATTATGGAAGCCATCGAGCTTTCTGGACCTCGGTGA 2091 0.4295 MLALLFNPETKRQCLPXNSKRGWLLFDAKQSRVTRNSAVKIPVKSFRLFRVLLDLISCFMEDVKRAVWFVFFLWNWLGAAGKADSLLSPKGVNYEVSALMSMKNKMKDELRVMDGWDINSVDPCTWNMVGCSAEGYVISLDMASMGLSGTLSPGIGNLSHLRTLLLQNNQLSGPVPAEIGKLLELQTLDLSGNQFVGEIPSSLGFLTRLSYLRLSRNKLSGQIPQLVANLTGLSFLDLSFNNLSGSIPKILAKGYSISGNNFLCASSSGQICMGVSNPLNDTGSSLEVGSHHHRVLSVAIGITCTFLISAMLLICCVHWYRSRILYTSYVKEDYEFDIGHLRRFSFRELQSATSNFSPKNILGQGGFGVVYKGCLPNKMTVAVKRLKDPNYTGEVQFQTEVEMIGLAVHRNLLRLYGFCMTSHERLLVYPYMPNGSVADRLRDTCREKPSLDWNRRMRIALGAARGLLYLHEQCNPRIIHRDVKAANILLDESFEAVVGDFGLAKLLDQRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQKALDAGNGQIQKGMILDWVICFSLVFFEQQLELLQVKTLFEEKRLEVLVDRDLRGRFDPIELEQAVKLSLQCTQSHPSLRPKMSEILRILEGLVGQGQPEEESHGGGNLYDERNCSFSRNYSDGHDEPSFIMEAIELSGPR 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0874 696 FunFam Somatic embryogenesis receptor kinase 1 326 431 - -
Lele13g0874 696 Gene3D Phosphorylase Kinase; domain 1 326 431 - -
Lele13g0874 696 Pfam Leucine rich repeat N-terminal domain 93 132 IPR013210 -
Lele13g0874 696 Gene3D Transferase(Phosphotransferase) domain 1 432 653 - -
Lele13g0874 696 ProSitePatterns Protein kinases ATP-binding region signature. 362 384 IPR017441 GO:0005524
Lele13g0874 696 SUPERFAMILY Protein kinase-like (PK-like) 340 646 IPR011009 -
Lele13g0874 696 ProSiteProfiles Protein kinase domain profile. 356 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0874 696 FunFam Putative LRR receptor-like serine/threonine-protein kinase 92 274 - -
Lele13g0874 696 Gene3D Ribonuclease Inhibitor 92 274 IPR032675 -
Lele13g0874 696 SMART serkin_6 356 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0874 696 FunFam Somatic embryogenesis receptor-like kinase 1 432 659 - -
Lele13g0874 696 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 69 644 - -
Lele13g0874 696 ProSitePatterns Serine/Threonine protein kinases active-site signature. 478 490 IPR008271 GO:0004672|GO:0006468
Lele13g0874 696 SUPERFAMILY L domain-like 94 262 - -
Lele13g0874 696 Pfam Protein kinase domain 359 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0874 Lele-ChrLele13 20283526 20287467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0874 100 696 Receptor kinase-like Gene Family AT5G45780 70.569 0.0 833
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lele13g0874 Pkinase 8.8e-44 CL0016