Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0867 ATGGGAGCTAAGGTTATAGACTCCTATTTTTGTAGATTCTGGATTCTTCTGGCGTTGTTTGCTATTGTGGATTCTTCCTGCGACAGCACCGACCATGGGTTGGTCTCCAGGGCCTTTCAATCTGTCTCTGGCTTCAATGTTTCCTGGTTCCATTCGCACGGTTCAAACTGTTCAAAAGCTTCTCAGATTACTTCGATACAGCTTTCTTCCAGGAATCTGAGTGGGGCTATCTCTTGGGCTTTTATCAGGAACATGTCCAACTTGCAGGTTCTCGATCTTTCTGGGAATTTTCTCCAAGGCCAGGTACCTCGTTGGTTTTGGGCATCTCCCAGATTATCGAAAGTTGATCTTTCTAACAATAAGTTTGGAGGGAGCATTGACCTCGAATATTCCCCCACAGGAAACTCTTCGTTTTCATCGCTTCAAAATCTCAATCTCTCTCATAACAGGTTCACCAATCTGCTTCAACTCTCTGGGTTCTCCAACCTCACAATTCTCGACCTCTCGCATAACAATTTGACGACTCTCCCTTCTCGGCTTCAAAACCTCCCCGGATTACACCATCTCGATCTCTCGAGCTGCAATATCAAAGCAAACGTAAAACCTATTTCTGCTCTGTGCTCGCTGAATTACTTGGACTTGTCAAACAACGCTTTCAATGGTAGTTTTCCTTCCGATTTCCCTCCTCTGCACAAGCTCATGTTCCTCAACATTTCTTACAACAACTTCACAGCACTGGGTCACTTAGATGAGTACAAGAAATTTGGCGACTCAGCTTTCATTGACGCCGGAAACAACTTCGCTCCCAATACATCTAAATCTAATACCCCAAGTCATGATCCACCTTCTCCTCATGCTTTAAAAGACTCGACGAAGCGCCACCACAAACACAAGCACAAAACTCTGGTTGTGGCGGTGTCCTCTGCTTCAGCATTTGCGCTGGTTCTATTGAGTATATGGGTGTTTTGTATTTACAGAAAGAAGAGACGACTGGCGAAGAAAATAAAATGGGAAATCTCGAAGCCGGTGCCTTTGGGAATAAAGTTGGACAAATCGGGGCCTTTCGCGTTCGAAACGGAGTCAGGAAGCTCGTGGGTGGCGGATTTGAAGGAGCCATCGTCGGCACCGGTGGTAATGTTCGAGAAGCCATTGATGAGCCTGAGCTTCGAGGACCTGATCGCCGCCACGTCACACTTCGGCAAAGAGTCGCTGCTGGCGGAGGGAAGGTGCGGGCCCGTGTACAGAGCCGTCGTCATCCCCGGTGACATCCACGTGGCAATCAAGGTGCTGGAGAATGCAAGAGACGTCGATAGGGATGACGCCATCGCGCTGTTCGTTGACCTGTCTAAGCTCAAACACCCCAATTTATTGCCACCCTCCGGCTACTGCATTGCAGGCAGTGAGAAGCTGATTTTGTACGAGTTCATGTCAAACGGCGATTTGGGTAGGTGGCTACAGGAGCTGCCAACGGGGCAAACTAACGTGGAGGACTGGACCGGTGACACGTGGGAGATTCAAAACGGCTCCGGATCGCAGGCCCCATCCCCGCCGGAGAAGATGGATTGGCTAACACGACACCGTATTTCCGTCGGGATAGCGCGTGGACTAGCGTATCTTCACCACTCAGGGTCAAAGCCAGTCGTCCACGGTCACCTAGTGCCTTCAAATATCTTGCTCGCCGACGACTTGGAGCCCCGGATAGCCGATTTCGGGATCGGAAACATCGGGAAGGAACAACGGGGCCCGAATTGCAGCACAGAGACGGACGTATACTGCTTCGGGGTGGTGCTGATGGAGCTGTTAACGGGTGAGCCCGGCACGGCGGAGACGGTGGTTCGGGTGAGAAAGGCGGTGAGGGAGGGCCAGGGGGAGCGCGCGTTGGACGAGAGGCTAACACTAAGCTGCGACTGGGAAAGCGAGATGCTGGAGAGCCTGCGAGTCGCGTGCTTGTGTACGGCCGAGTCACCGGGCAAAAGGCCCACCATGCAACAGGTCCTGGGTTTGCTAAAAGACATCCACCCACACGACCCGAGTTGA 2037 0.515 MGAKVIDSYFCRFWILLALFAIVDSSCDSTDHGLVSRAFQSVSGFNVSWFHSHGSNCSKASQITSIQLSSRNLSGAISWAFIRNMSNLQVLDLSGNFLQGQVPRWFWASPRLSKVDLSNNKFGGSIDLEYSPTGNSSFSSLQNLNLSHNRFTNLLQLSGFSNLTILDLSHNNLTTLPSRLQNLPGLHHLDLSSCNIKANVKPISALCSLNYLDLSNNAFNGSFPSDFPPLHKLMFLNISYNNFTALGHLDEYKKFGDSAFIDAGNNFAPNTSKSNTPSHDPPSPHALKDSTKRHHKHKHKTLVVAVSSASAFALVLLSIWVFCIYRKKRRLAKKIKWEISKPVPLGIKLDKSGPFAFETESGSSWVADLKEPSSAPVVMFEKPLMSLSFEDLIAATSHFGKESLLAEGRCGPVYRAVVIPGDIHVAIKVLENARDVDRDDAIALFVDLSKLKHPNLLPPSGYCIAGSEKLILYEFMSNGDLGRWLQELPTGQTNVEDWTGDTWEIQNGSGSQAPSPPEKMDWLTRHRISVGIARGLAYLHHSGSKPVVHGHLVPSNILLADDLEPRIADFGIGNIGKEQRGPNCSTETDVYCFGVVLMELLTGEPGTAETVVRVRKAVREGQGERALDERLTLSCDWESEMLESLRVACLCTAESPGKRPTMQQVLGLLKDIHPHDPS 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0867 678 FunFam Calmodulin-binding receptor kinase CaMRLK 139 249 - -
Lele13g0867 678 FunFam Putative LRR receptor-like serine/threonine-protein kinase 360 475 - -
Lele13g0867 678 Gene3D Transferase(Phosphotransferase) domain 1 476 676 - -
Lele13g0867 678 ProSiteProfiles Leucine-rich repeat profile. 140 161 IPR001611 GO:0005515
Lele13g0867 678 PRINTS Leucine-rich repeat signature 163 176 - -
Lele13g0867 678 PRINTS Leucine-rich repeat signature 206 219 - -
Lele13g0867 678 Gene3D Ribonuclease Inhibitor 134 262 IPR032675 -
Lele13g0867 678 ProSiteProfiles Leucine-rich repeat profile. 162 184 IPR001611 GO:0005515
Lele13g0867 678 Pfam Leucine rich repeat 62 122 IPR001611 GO:0005515
Lele13g0867 678 Pfam Leucine rich repeat 140 196 IPR001611 GO:0005515
Lele13g0867 678 Gene3D Phosphorylase Kinase; domain 1 359 475 - -
Lele13g0867 678 MobiDBLite consensus disorder prediction 270 292 - -
Lele13g0867 678 SUPERFAMILY L domain-like 46 247 - -
Lele13g0867 678 SUPERFAMILY Protein kinase-like (PK-like) 389 672 IPR011009 -
Lele13g0867 678 Pfam Protein tyrosine and serine/threonine kinase 403 573 IPR001245 GO:0004672|GO:0006468
Lele13g0867 678 SMART LRR_typ_2 138 159 IPR003591 -
Lele13g0867 678 SMART LRR_typ_2 206 229 IPR003591 -
Lele13g0867 678 SMART LRR_typ_2 85 108 IPR003591 -
Lele13g0867 678 SMART LRR_typ_2 230 253 IPR003591 -
Lele13g0867 678 SMART LRR_typ_2 160 182 IPR003591 -
Lele13g0867 678 Gene3D Ribonuclease Inhibitor 34 133 IPR032675 -
Lele13g0867 678 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 46 672 - -
Lele13g0867 678 ProSiteProfiles Protein kinase domain profile. 399 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0867 Lele-ChrLele13 20232961 20235455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0867 63 672 Receptor kinase-like Gene Family AT5G07280 30.280 7.25e-69 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Lele13g0867 PK_Tyr_Ser-Thr 1e-18 CL0016