Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0864 ATGCAGAAATATGAGCTTGGCCGTTTGCTAGGCCAAGGCTCATTCGCTAAGGTGTATCATGCCAAAAACCTGAAAACAAGGCAACATGTTGCTATGAAGGTCATTGATAAAGAGAAGATTGCCAAAGTTGGCTTGTACGACCAAATCAAGAGAGAAATCACTGTGATGAGCATGGTGAAGCATCCCAACATTGTGCAGCTTTACGAAGTCTTGGCAAGCAATACCAAGATTTATTTCGCCATGGAGTATGTGAAAGGTGGCGAGCAAGAGGGAAAAACCGATGGACTTCTACCCACCATGTGCGGGACTCCATCTTATGTAGCCCCTGAAGTGATCAATAAGAAAGGCTATGATGGAGCCAAGGCAGATATTTGGTCTCGTGGGGTGATTCTTTTGGTTCTTCTTGTTGGGTTTCTTCCTTTCGAAGACAATAATTTAATTGCAATGTCCATGAAGATTAGTAAAGCAGAGTTTACGTGTCCACTGTGGTTCCCATCTGTGGCCAGAACGCTTCTCTCCAGAATCCATGATCCAAACCCTAGAAGAAGAGTAACTGTTTCCCAGATAAAGGAAACACCATGGTTCAGAAAGGGATATCAGCAGATTGAAGCAACTCTGTTAGTACAATCGCCTTCTTGTAATGATGACTTAGTGCCCAAAAAACGAAGATTTGACCTATCTCCTCTGTTTGAGAAAGATAAGATTTCAATTCACGAGGCAAGATTCACCACCACGAAAGAAGTCTCCACGATTGTGTCAAAACTGGAGGAGATATCTCAGGTGGATAGCAAATTCAAGGTTTTGAAGAGAAATGGTACGTTGACATTGCAGGGTAGCAAGGTGATCAATTCTTCAGCTTCAGTTTTTGTCGAGTTTGAAGTTTTGTTAATTCCTGGAGACATTGGAGAGAAACTGTAA 918 0.4237 MQKYELGRLLGQGSFAKVYHAKNLKTRQHVAMKVIDKEKIAKVGLYDQIKREITVMSMVKHPNIVQLYEVLASNTKIYFAMEYVKGGEQEGKTDGLLPTMCGTPSYVAPEVINKKGYDGAKADIWSRGVILLVLLVGFLPFEDNNLIAMSMKISKAEFTCPLWFPSVARTLLSRIHDPNPRRRVTVSQIKETPWFRKGYQQIEATLLVQSPSCNDDLVPKKRRFDLSPLFEKDKISIHEARFTTTKEVSTIVSKLEEISQVDSKFKVLKRNGTLTLQGSKVINSSASVFVEFEVLLIPGDIGEKL 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0864 305 ProSiteProfiles Protein kinase domain profile. 1 195 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0864 305 Gene3D Transferase(Phosphotransferase) domain 1 98 196 - -
Lele13g0864 305 Gene3D Phosphorylase Kinase; domain 1 1 87 - -
Lele13g0864 305 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 94 280 - -
Lele13g0864 305 Pfam NAF domain 223 267 IPR004041 GO:0007165
Lele13g0864 305 Gene3D Kinase associated domain 1, KA1 216 297 - -
Lele13g0864 305 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Lele13g0864 305 Pfam Protein kinase domain 4 88 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0864 305 Pfam Protein kinase domain 97 195 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0864 305 SUPERFAMILY Protein kinase-like (PK-like) 2 219 IPR011009 -
Lele13g0864 305 FunFam Non-specific serine/threonine protein kinase 1 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0864 Lele-ChrLele13 20214022 20215499 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0864 1 88 CBL-interacting serine-threonine protein kinases AT5G45820 76.136 2.86e-40 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele13g0864 Pkinase 2e-17 CL0016