Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0855 ATGCCCGTCCGCGAAGATTGTTGGAGCGAGGAAGCTTCCTCCACCCTCGTCGACGCTTGGGGCCGCCGTTATATACAGCTTAACCGCGGCAACCTCCGCCAGAAGGACTGGAAGGACGTGGCCGACGCTGTCAACGCTCTACATGGTCATACCAAGAAGACGCATCGTACGGATGTTCAGTGCAAGAACCGCATCGATACCATTAAGAAGAAGTATAAGTCGGCAGCGGCACTATTAGGGGATGGTTTCTTCATGAGGAATTATTCAGCTGTGGCAGCCGCTGCATCTGCAGCAGAGGCTGATGAGGACGAAGACGATGAAGAGGATGGAGATGAAGGGAGGGGAAGTGAGGTTGAGGAAGAAGAGAGGGAGAAGGAAGGGATGAGGAGCTTGGCAAAAGCGATAGAGAGGTTCGGGGAAGTTTATGAGAGAATGGAGAGAGAGAAATTGAGGCAAATGATGGATTTGGAGAAACAGAGGTTGCAGTTTACTAAAGATCTGGAAGTACAGAGGAGGCATATGTTCATGGACAAGCAGGTTCAGTTGGGGAGGATCAAACGCGGGAAACGGTCTGGTTCTAATGGCACCTTCATCTCCTGTTTTTGGGGTAATTCCTTCCGAGTGAATGTTGTCATCGGCAAGGTTGAGGCTGCAGGCTCCAAAACCTCACAACTCTGGTGCAACAGGGCAGGGTAG 696 0.5144 MPVREDCWSEEASSTLVDAWGRRYIQLNRGNLRQKDWKDVADAVNALHGHTKKTHRTDVQCKNRIDTIKKKYKSAAALLGDGFFMRNYSAVAAAASAAEADEDEDDEEDGDEGRGSEVEEEEREKEGMRSLAKAIERFGEVYERMEREKLRQMMDLEKQRLQFTKDLEVQRRHMFMDKQVQLGRIKRGKRSGSNGTFISCFWGNSFRVNVVIGKVEAAGSKTSQLWCNRAG 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0855 231 Pfam Myb/SANT-like DNA-binding domain 5 76 IPR044822 -
Lele13g0855 231 MobiDBLite consensus disorder prediction 96 129 - -
Lele13g0855 231 MobiDBLite consensus disorder prediction 98 117 - -
Lele13g0855 231 Gene3D - 8 74 - -
Lele13g0855 231 Coils Coil 128 148 - -
Lele13g0855 231 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 86 189 IPR044823 -
Lele13g0855 231 FunFam trihelix transcription factor ASIL2 8 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0855 Lele-ChrLele13 20158200 20159476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0855 4 82 Trihelix Transcription Factor Family AT3G14180 55.696 1.40e-25 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele13g0855 Myb_DNA-bind_4 1e-18 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0855 13 20158200 20159476 Lele13g0855 13 20158200 20159476 ECH
Lele13g0855 13 20158200 20159476 Lele14g0752 14 18545793 18546662 ECH
Lele13g0855 13 20158200 20159476 Lele15g1623 15 9637014 9640411 hybridization
Lele13g0855 13 20158200 20159476 Lele16g1653 16 9594204 9595067 hybridization