Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0846 ATGGTTTACTGCTCTTATAATTCGATTTCTGCTTCTGGGTCCGATATCTCGAGGCTGTTCGATCCAAGTTCGCGTAAAATTGTTGATTCTAATGGGGTTTCGCAGAGTGGGTTGTCGTCACCGAATTCGTTGGTGTTGAATAGTGAGAAGGAGGATCTAATTAATTCCTCTTTGAAGATAGGAAAGAAAGAGGCGTCTGAGGCAAAAGCTTTGGCTGCTATGAAGAACCACAGTGAAGCAGAGAGAAGGAGAAGGGAGCGAATAAATGGTCATCTCGATACACTTCGTGGTCTTGTACCCAGCAATGTGAAGGTAATGTTTGCTTTTCGCTCAACTGGAAATCTTATGGATAAAGCAACGTTATTGGGTGAAGTTATCAACCGGGTTAAGTTACTGAAGAAGAATGCAATGGAAGCAAGCAAAGGTTTTCTCATCCCAATAGATGATGATGAAGTTAAAGTTGAACCATACAACCATGAAGGAAGAGAAGGGTCATCAATGTTTTACATGGCATCTATATGTTGCGATTACCGGCCGGAGCTACTATCTGACCTAAGACAGGCCCTTGATGGCCTTCAACTACAATTGATGAGGGCAGAAATATCAACTTTGGGAGGAAGGGTGAAGAATGTATTTTTCTTTAGATGCTGCAAATTAACAGAACATATGAATATTGAGGCATGCCAACTTGTTCCAAGAACTGTCCACCAGGTACTAAGTTCTATACTGGAGAAGGCTTCTGGCTCACTGGAATACTCTCTAGGAATGTCGTCACTTCGAAGCAAGCGTAGAAGACTTTGCTCCATTGAAACATCAACTTCCTCATGTGCTGTGCATAAATGA 843 0.4211 MVYCSYNSISASGSDISRLFDPSSRKIVDSNGVSQSGLSSPNSLVLNSEKEDLINSSLKIGKKEASEAKALAAMKNHSEAERRRRERINGHLDTLRGLVPSNVKVMFAFRSTGNLMDKATLLGEVINRVKLLKKNAMEASKGFLIPIDDDEVKVEPYNHEGREGSSMFYMASICCDYRPELLSDLRQALDGLQLQLMRAEISTLGGRVKNVFFFRCCKLTEHMNIEACQLVPRTVHQVLSSILEKASGSLEYSLGMSSLRSKRRRLCSIETSTSSCAVHK 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0846 280 PANTHER TRANSCRIPTION FACTOR BHLH30 34 270 IPR045847 GO:0003700|GO:0006355
Lele13g0846 280 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 76 134 IPR036638 GO:0046983
Lele13g0846 280 Pfam Helix-loop-helix DNA-binding domain 76 130 IPR011598 GO:0046983
Lele13g0846 280 Gene3D - 67 141 IPR036638 GO:0046983
Lele13g0846 280 SMART finulus 78 138 IPR011598 GO:0046983
Lele13g0846 280 Coils Coil 182 202 - -
Lele13g0846 280 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 72 132 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0846 Lele-ChrLele13 20092474 20095316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0846 59 273 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 39.352 2.98e-29 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele13g0846 HLH 1.2e-07 No_clan