Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0832 ATGAAAGAGTTTCTGCATTTGGACAAAGAGTTCCTGCCGTACAAACAGAACATTGGCCCAGTTGTCAGAGCCTGCTTTCATGTGAGAGACGAGTGCTTGGAAAAGTTCAAGTGCTCGCTGCTTGAGCAATCTGGATTGAACTTCACCACTTTTGAGGCTTTTGGGTGCATACGGATTGAAGCAGATAAAAAGATAAAGTTTGCATACTCAATCAACATAAGGAAACTGGTGAAGCCACCGCTTCCAGGAGGCTACTGGGGCAACGGTTGTGTCCCAATGCACGTGAAGATGAGGGCAAAGGATGTGATAGAGAAACCCACATGGGAAACAGCAGAGCAGATAAAGAAGAGCAAAAGCAATGTGAGTGACGAATTGGAGACATTTGGACGTTCGAGCTTGGATTTTGGGTGGGGAGGTCCTGTGACTGTGTTGCCTCTTGCAAGGAATCTGCTTGGAAAAGCTTCTGCTGCTGCTTCTTCAACAGGCTTCGCTTCCTCTATCTTTGTGATTATGGCGTCCACTCTGGGAACTTCTTCATTTACCACCTTCCCTTCTCGATACCTCTCTTCTCCTTCTTCCAGAATTTCCCTTCAGTCTCTCTCTCTAGCCCCAGCTCAAAGCTATGGGCGCAAGTTCTACGGAGGAATTGGAATCCGCAGCGGCTTAAAGGGAAGGTCTCGCTTCTCAGTGGCCAGCGTTGCCACTGAAGTAAACATTGTAGAACAGGCTCAGAAGGCTGATTCTGAAGATAGCCAGAGGCCAGTATACCCATTTTCTGCTATAGTAGGACAAGATGAGATGAAGTTGTGCCTTCTACTTAACGTGATTGATCCCAAGATTGGAGGGGTGATGATCATGGGGGATAGAGGGACAGGGAAATCAACAACTGTTAGGTCATTAGTGGACTTGCTTCCTCAAATTAGGGTTGTTTATGGGGACCCATATAACTCAGATCCAGAAGATCCAGAGTCCATGGGCGTGGAAGTGAGAGAACGTGTAACAAACGGAGAGAAACTTGAGGTTGCGTTGACTAAAATCAACATGGTTGATTTGCCATTAGGAGCGACAGAAGATAGAGTTTGTGGAACAATTGACATTGAAAAAGCCCTCACAGAGGGTGTCAAAGCATTTGAGCCTGGTCTACTTGCTAAAGCCAATAGGGGAATCCTCTATGTTGATGAAGTTAATCTGTTGGATGATCATCTGGTAGATGTTTTACTAGATTCTGCTGCTTCTGGCTGGAACACAGTGGAGAGGGAAGGTATTTCGATCTCCCATCCGGCTCGGTTCATCTTAATTGGTTCAGGCAACCCAGAAGAAGGAGAGCTTAGGCCACAGCTTCTTGATAGATTTGGAATGCATGCTCAAGTAGGTACTGTGAGGGATGCTGAGCTAAGAGTGAAAATCGTGGAGGAGAGAGCAAGGTTCGATAGTAACCCAAAGGTGTTCCGAGATTCTTACAAAGCAGAGCAGGAAAAGCTTCAAGGACAGATTGCTTCAGCAAGAAGTAATCTTTCTTCAGTTCAGATTGATCAAGATCTCAAGGTGAAGATCTCCAAGGTTTGTGCGGAGTTGAATGTGGATGGACTGAGAGGAGACATAGTGACAAATAGAGCTGCAAAAACCCTAGCTGCTCTTAAGGGAAGGGACAAAGTGAGCGCAGAGGATATTGCTACAGTCATCCCTAACTGCTTGAGACACCGCCTGAGGAAGGATCCCTTGGAGACAATAGACTCAGGTTCACTTGTAATTGAGAAGTTTTATGAGGTTTTTAGCTGA 1779 0.4592 MKEFLHLDKEFLPYKQNIGPVVRACFHVRDECLEKFKCSLLEQSGLNFTTFEAFGCIRIEADKKIKFAYSINIRKLVKPPLPGGYWGNGCVPMHVKMRAKDVIEKPTWETAEQIKKSKSNVSDELETFGRSSLDFGWGGPVTVLPLARNLLGKASAAASSTGFASSIFVIMASTLGTSSFTTFPSRYLSSPSSRISLQSLSLAPAQSYGRKFYGGIGIRSGLKGRSRFSVASVATEVNIVEQAQKADSEDSQRPVYPFSAIVGQDEMKLCLLLNVIDPKIGGVMIMGDRGTGKSTTVRSLVDLLPQIRVVYGDPYNSDPEDPESMGVEVRERVTNGEKLEVALTKINMVDLPLGATEDRVCGTIDIEKALTEGVKAFEPGLLAKANRGILYVDEVNLLDDHLVDVLLDSAASGWNTVEREGISISHPARFILIGSGNPEEGELRPQLLDRFGMHAQVGTVRDAELRVKIVEERARFDSNPKVFRDSYKAEQEKLQGQIASARSNLSSVQIDQDLKVKISKVCAELNVDGLRGDIVTNRAAKTLAALKGRDKVSAEDIATVIPNCLRHRLRKDPLETIDSGSLVIEKFYEVFS 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0832 592 Gene3D - 13 126 IPR023213 -
Lele13g0832 592 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 254 590 IPR027417 -
Lele13g0832 592 PANTHER MAGNESIUM-CHELATASE SUBUNIT CHLI 197 591 IPR045006 -
Lele13g0832 592 Coils Coil 484 504 - -
Lele13g0832 592 Pfam AAA lid domain 518 576 IPR041628 -
Lele13g0832 592 Pfam Magnesium chelatase, subunit ChlI 368 438 IPR000523 GO:0005524
Lele13g0832 592 Gene3D - 503 590 - -
Lele13g0832 592 Gene3D - 253 458 IPR027417 -
Lele13g0832 592 FunFam Mg-protoporphyrin IX chelatase 253 458 - -
Lele13g0832 592 Pfam Transferase family 61 124 - -
Lele13g0832 592 TIGRFAM BchI-ChlI: magnesium chelatase ATPase subunit I 256 591 IPR011775 GO:0005524|GO:0015995|GO:0016851
Lele13g0832 592 FunFam Mg-protoporphyrin IX chelatase 504 590 - -
Lele13g0832 592 SMART AAA_5 279 461 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0832 Lele-ChrLele13 20004569 20009059 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0832 13 20004569 20009059 Lele13g0832 13 20004569 20009059 ECH
Lele13g0832 13 20004569 20009059 Lele15g1645 15 9785086 9786804 hybridization
Lele13g0832 13 20004569 20009059 Lele16g1681 16 9752263 9753767 hybridization