Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0831 ATGGTTTCGATCTTGAGAACGCTATCGACGACCGCGTCGTTACCCACAGCATCTCTCTCCAAATTCATGGAGTCTTCTTCCAACGTCAATAACAATTATAATGCGGGATTGCAGAGACTACTCGCTTTAGCTCAGCAGCTTCGCCTTTACAAACCCCCATCATTTCATGACGACGTCGATGAGCAAACAATTGAAGAAAATGGGGGGAAGGTTGTTTCCCAGGTCGGGTTTCCAGAGTCCACTACTCTAATTGCTCAAAACCCGGAAAAATTTAGACCTAAACGAGCTGCCGTTTTGATCTGCCTTTTCGAAGGGGATCCTGGGGATCTAAGGGTGATTGTAACTAAGAGATCATCCAAGACGTTAAGTCACTCGGGTGAAGTGGCCTTGCCTGGTGGGAAAGAAGATGAAGGGGATAAGGATGATGAGATACTGCAAAAAGAGAGGCGAAGGAGGAAATTGGGTTGGACCCTGAACTTGTCGATGTGGTTACTTTTCTCGAACCATTCTTATCAAAGAAGTTATGGATTTCAGGTGCACCTACTGAGAGTGGTTCCTGTCATTGGAATACTTCATGACAAGAGAGCATTCAAACCCGTTCTGAATCCTGCTGAAGTGGAATCGGTATTTGATGCACCTTTAGAAATGTTTCTCAAGGATGAAAATCGTTGTCAGGAGGAAAGGGAGTGGAGGGGACAGAAGTATCTACTACATTTCTTTGACTACGAAACCAATCATAAAAAATATCTCATATGGGGTTTAACTGCTGGGATCTTGATTAGAGCTGCATCAGTGGTGTATCAAGGGCCCCCAGCTTTCGTGGAGCAAAATCCTAGGTTCAAGTTTCCCCAGGATGTAAGCAAGGATTCTGTAATGCAGGAACTTCGTGCCAGTTCATTTGTCATCCTTCCTGAAATTTCAAAGCTTCTACCTTTTGCAAGTTATTCACCACTTTGCCTCTCTCTGAGCCTGAATAGTGCTTTAGGTTTTCTGCCTGAGCTACATATCCTTTTTGAGGTGCTTGGAACTAGGTTGGGGATTAACGATGCTCATGCAACGAACTGGCTACAATTTTGTCCTTCTTTGGATCGTGTCCGCAATTCTCCATTTCCTCACGTTTGGTCTGCGGATGAGAAAGCGAAGCACGCTGTAGAAATGGGTTCGAATAAGTCAGACCCGAGAATTTCTCAGAGAATACAAGCTTTACTTCAGCATTTACGAAGACCCGAACCTAGCGGCTTCAACAATTCCTCGTCAAGCCAATTCAGACCCGCGAAGAGAGCTTCCGTCTTGATCTGCCTCTTCGAAGGGGATGATGGGAATCTACGCGTATTTCTCACTTTGAGGGCTTCGTCTCTGTCAACCCACTCAGGTGAAGTTGCGCTTCCCGGTGGGAAGAGAGAAGACGGCGATGCTAACAATGTAGAAACGGCCCTGAGGGAGGCTAAGGAGGAGATTGGTTTGGACACGTCTCTTGTTACTGTTATTACTTCTCTTGAGCCATTTGGCACTAAGTATGGTATGATAATAACTCCTGTAATTGGCATACTGTCAAACAAGGATGCATTTACTCCAATGCTAAATCCAAGTGAAGTAGAAGCGCTATTTGATGTTCCATTGGAGATGTTCCTCAAGGATGAGAATAGGAGAGATGTGGAAACAGAATGGATGGGAAAGAAGCATCTAATACATTTCTTTGATTATGAAGTTGATAATAAGAAATATGTGATTTGGGCTGTAACTGCGGCGATGCTAATCAGGGCAGCTTCACTTATATACCAGCGGCCACCAGCATTTGTGGAGTTGAGGCCTAGCTTATGGGGAGGACTTACTGAAAGTGACATTTTAATACTGCAGCGTAGTTCTAAACGGTGA 1875 0.4469 MVSILRTLSTTASLPTASLSKFMESSSNVNNNYNAGLQRLLALAQQLRLYKPPSFHDDVDEQTIEENGGKVVSQVGFPESTTLIAQNPEKFRPKRAAVLICLFEGDPGDLRVIVTKRSSKTLSHSGEVALPGGKEDEGDKDDEILQKERRRRKLGWTLNLSMWLLFSNHSYQRSYGFQVHLLRVVPVIGILHDKRAFKPVLNPAEVESVFDAPLEMFLKDENRCQEEREWRGQKYLLHFFDYETNHKKYLIWGLTAGILIRAASVVYQGPPAFVEQNPRFKFPQDVSKDSVMQELRASSFVILPEISKLLPFASYSPLCLSLSLNSALGFLPELHILFEVLGTRLGINDAHATNWLQFCPSLDRVRNSPFPHVWSADEKAKHAVEMGSNKSDPRISQRIQALLQHLRRPEPSGFNNSSSSQFRPAKRASVLICLFEGDDGNLRVFLTLRASSLSTHSGEVALPGGKREDGDANNVETALREAKEEIGLDTSLVTVITSLEPFGTKYGMIITPVIGILSNKDAFTPMLNPSEVEALFDVPLEMFLKDENRRDVETEWMGKKHLIHFFDYEVDNKKYVIWAVTAAMLIRAASLIYQRPPAFVELRPSLWGGLTESDILILQRSSKR 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0831 624 ProSiteProfiles Nudix hydrolase domain profile. 93 255 IPR000086 -
Lele13g0831 624 FunFam Nudix hydrolase 11 409 590 - -
Lele13g0831 624 SUPERFAMILY Nudix 426 585 IPR015797 -
Lele13g0831 624 FunFam Nudix hydrolase 11 75 264 - -
Lele13g0831 624 Pfam NUDIX domain 426 543 IPR000086 -
Lele13g0831 624 ProSiteProfiles Nudix hydrolase domain profile. 425 559 IPR000086 -
Lele13g0831 624 CDD CoAse 426 586 IPR045121 GO:0010945
Lele13g0831 624 CDD CoAse 94 260 IPR045121 GO:0010945
Lele13g0831 624 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 79 264 - -
Lele13g0831 624 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 410 590 - -
Lele13g0831 624 SUPERFAMILY Nudix 91 259 IPR015797 -
Lele13g0831 624 PANTHER NUDIX HYDROLASE 395 608 IPR045121 GO:0010945
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0831 Lele-ChrLele13 19997191 20003098 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0831 13 19997191 20003098 Lele13g0831 13 19997191 20003098 ECH
Lele13g0831 13 19997191 20003098 Lele15g1647 15 9790924 9798202 hybridization
Lele13g0831 13 19997191 20003098 Lele16g1684 16 9760101 9765366 hybridization