Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0822 ATGTTCAGATCCAAGCCTTGCAACTCCCTCCACCACCAATGGAAGCATGACAACAACATAAACTCCTCTTTCATCTCGCCTTCAAGCTGCCACAAAACCACTTACTCATCAGTAGTTGAGGAGAGAAGTGCAGAGCCAAAGCCAAGATGGAACCCAAAACCAGAGCAGATTCGGATTCTGGAAGCCATATTCAACTCAGGGATGGTGAACCCTCCGAGAGACGAGATCAGGAAGATCAGAGCCCAACTTCAAGAGTACGGCCAAGTCGGTGATGCCAATGTCTTCTACTGGTTCCAGAACCGCAAATCCAGATCCAAGCACAAGCTTCGTCACCTCCACAACTCTTCTAATAACGCCCATCAAGCCCAAAACTCAAACGATTCCTCTCCCAAAGAAATCATAATACCACCTAATAAGCCATTAATGTCTAATAATATCGTCTTCTCCGACGTCTCTTCTGATATTGAAGTTCCCATGCCTTGTACTACGCCGCCACCGCCGCTGCCGCCTCAGCCTTTCTTCTTTATTCCTGTGCATCAACAGAATGGAGGAGCAGGAGGAGTGGCTAATAATGTTGTTCCTGTTTCTGTTCCTATTGCACAAGGTTTTTGCTTCTCTGATCTATCAAGTGTGGTTCAACCTGAAGCTCCTCGTGATCATCATCATCATCATCAACAACAAATCAATGTTGGGTCTTGCACTAGTCTTTTGCTTAACGAAATCATGACCAGTTCATCCTCCGAGAATGACCAAGACAAGGTTATACAAATCCAACAACACCCTCCTTTAATCACTCACGCTACTGTCCCTCCCTCCAGCACCACCCCTGTTACTGTTCCATCCCCCATCTCTGAGATTCAAGGCTTCGGTGAGGCGGGGACGGCAGAGAGCCCACCTGGTGGTTCGATGATGAAATCGACAGTGTTCATTAACGACGTCTCATTTGAAGTGGGTGTGGGACACCTCAACGTGCGGGAGGCCTTCGGCGATGAAGCGGTTCTCATCCACGGCTCCGGTCAGCCTGTGCTCATCGACGAATGGGGAGTCACGCTTCAGCCTCTCCAGCACGGCGCATTTTATTACCTGGTGCGCAGATTTACAAGGAAGAAATATCTGGAGGAGGACGAAATGGGATTTAATTAG 1143 0.4838 MFRSKPCNSLHHQWKHDNNINSSFISPSSCHKTTYSSVVEERSAEPKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAQLQEYGQVGDANVFYWFQNRKSRSKHKLRHLHNSSNNAHQAQNSNDSSPKEIIIPPNKPLMSNNIVFSDVSSDIEVPMPCTTPPPPLPPQPFFFIPVHQQNGGAGGVANNVVPVSVPIAQGFCFSDLSSVVQPEAPRDHHHHHQQQINVGSCTSLLLNEIMTSSSSENDQDKVIQIQQHPPLITHATVPPSSTTPVTVPSPISEIQGFGEAGTAESPPGGSMMKSTVFINDVSFEVGVGHLNVREAFGDEAVLIHGSGQPVLIDEWGVTLQPLQHGAFYYLVRRFTRKKYLEEDEMGFN 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0822 380 FunFam WUSCHEL-related homeobox 11 47 114 - -
Lele13g0822 380 MobiDBLite consensus disorder prediction 265 285 - -
Lele13g0822 380 SUPERFAMILY Homeodomain-like 45 111 IPR009057 -
Lele13g0822 380 MobiDBLite consensus disorder prediction 107 133 - -
Lele13g0822 380 Pfam Homeodomain 47 107 IPR001356 GO:0003677
Lele13g0822 380 CDD homeodomain 46 108 IPR001356 GO:0003677
Lele13g0822 380 MobiDBLite consensus disorder prediction 115 132 - -
Lele13g0822 380 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 364 IPR044557 GO:0003700|GO:0050793
Lele13g0822 380 Gene3D - 47 112 - -
Lele13g0822 380 MobiDBLite consensus disorder prediction 265 282 - -
Lele13g0822 380 ProSiteProfiles 'Homeobox' domain profile. 43 108 IPR001356 GO:0003677
Lele13g0822 380 SMART HOX_1 45 112 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0822 Lele-ChrLele13 19924608 19926128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0822 1 363 Wox Gene Family AT2G33880 39.853 1.71e-73 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lele13g0822 Homeodomain 1.1e-14 CL0123