Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0820 ATGGATACTATGGAGGTTTACCGAGCTGTTCTGCCCACTGGAGAACGAGTTGCCATCAAACAGGCTGCAAAAGAATCCATGCAGGGTGCTGTAGAGTTTAAAACTGAGATTGAACTTCTATCAAGGGTCCACCAAAAGAATCTTGTAGGCCTTGTGGGTTTCTGTTTTGATAAAGGTGAACAAATGCTGGTGTATGAGTATGATCCAAATGGAACTTTAATGAATAGTCTTTCAGGAAAATCAGGGATCAGAATGGATTGGATGAGAAGGCTTAAAGTAGCCCTGGGTGCAGCCAGGGGTCTGGCCTATCTTCATGAACTTGCCAACCCTCCAATCATACACAGGGACATAAAATGGAGCAATATTCTGCTCGATGACCACCTTAACGTGAAACTTGCAGATTTCGGACCGTCCAAGCTTCTTGTTGACAGTGAAAGAGGCCACATCACCACTCAAGTTAAAGGGACAATGGGTTACTTGGATCCTGAGTATTACATGACCCAACAGTTGACTGAAAAAAGTGACGTATACAGCTATGGAGTGCTGATGCTGGAACTAGTGACAGCAAGAAGGCCAATAGAGAAAGGGAAATATATTGTGAGAGAGGTACAGAATGTGATGGATACATCAAAACAACTATTCAACCTTCATTCAATCATAGATCCATTCATCAACAAAGAAACTCCTCCACATGGTTTGGAGAAGTTTGTGCTCCTGGCAATGAGGTGTGTCAAAGAATATGCAGCTGAGAGGCCATCGATGGCTGAGGTGGTGAAGGAAATTGAGAATATAATGGAGCTTGCTGGATTGAACCCTACTTCTGAATCAGATCCAACGACAGAAGAAATTGATGTGGACGCAAGTGGCGGCAAATTACGACATCCTTATGGCGGCCATGAAGGTTTTAGCTTTTTCCTTCAACAAAGGTTCAACAAAGGTAGAACCTCAGTGATATTTTGCTGTGTTTTCTTTTCTTTTGTTTTTCCAATTCTGGTGCAATCCTTGAGTACTGATGTGTGA 1020 0.4275 MDTMEVYRAVLPTGERVAIKQAAKESMQGAVEFKTEIELLSRVHQKNLVGLVGFCFDKGEQMLVYEYDPNGTLMNSLSGKSGIRMDWMRRLKVALGAARGLAYLHELANPPIIHRDIKWSNILLDDHLNVKLADFGPSKLLVDSERGHITTQVKGTMGYLDPEYYMTQQLTEKSDVYSYGVLMLELVTARRPIEKGKYIVREVQNVMDTSKQLFNLHSIIDPFINKETPPHGLEKFVLLAMRCVKEYAAERPSMAEVVKEIENIMELAGLNPTSESDPTTEEIDVDASGGKLRHPYGGHEGFSFFLQQRFNKGRTSVIFCCVFFSFVFPILVQSLSTDV 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0820 339 SMART serkin_6 5 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0820 339 ProSiteProfiles Protein kinase domain profile. 1 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g0820 339 Gene3D Transferase(Phosphotransferase) domain 1 69 284 - -
Lele13g0820 339 ProSitePatterns Serine/Threonine protein kinases active-site signature. 112 124 IPR008271 GO:0004672|GO:0006468
Lele13g0820 339 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 68 277 - -
Lele13g0820 339 SUPERFAMILY Protein kinase-like (PK-like) 5 267 IPR011009 -
Lele13g0820 339 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 5 274 - -
Lele13g0820 339 Gene3D Phosphorylase Kinase; domain 1 2 68 - -
Lele13g0820 339 Pfam Protein kinase domain 5 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0820 Lele-ChrLele13 19916824 19919083 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0820 10 304 Receptor kinase-like Gene Family AT5G49760 62.752 2.39e-124 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Lele13g0820 Pkinase 9.9e-42 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0820 13 19916824 19919083 Lele16g1695 16 9817656 9823680 hybridization