Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0813 ATGGGTTTGATCGATCTCAACACTACTGAGGATGACGAAACGCCGTCGTCGGGTTCCTCTGCTTCATTGTCTTCTCGTTCCGGTATTAGCATTTCGGCCTCCACTTCTCCTTCGTCCGTGTGCTTGAAGCTATGGCACGCGTGTGCTGGTCCAATGATCACGTTACCGAAAAAGGGAAGCATGGTGGTTTACTTCCCACAGGGCCACCTTGAGCAGCAGGCTCGGGATTTTCCGGTCTCTGCTTACAATATCCCACCCCATGTTTTCTGTCGCGTTGCAGATGTTAAGCTCCATGCGGAGGAAGGTATGGATGAGGGGTACTGTCAGGTGTCTCTGGTTCCTGAAAGTGAGCAAGCTGAAAGAAGATTTCGGGGAGGTGAAATCGATGCTGACTCTGAGGATGAGGATGCTGCAGCTGCAGTGAAGTCTACAACACCACATATGTTCTGCAAGACCCTGACAGCTTCTGATACTAGCACTCATGGTGGTTTCTCTGTGCCTAGGCGAGCAGCTGAAGATTGCTTTCCTCGGCTGGATTACAATCAACAGCGTCCTTCACAAGAGCTTGTGGCAAAGGATCTGCATGGCCTGGAGTGGAAGTTCAGGCATATTTACAGGGGGCAGCCTCGCAGGCATTTGCTTACTACTGGTTGGAGCGCATTTGTAAACAAGAAGAAGCTTGTGTCTGGAGATGCTGTGCTGTTTCTGAGGGCTGAGGATGGAGTTCTGAGATTAGGCATTCGCAGGGCATCTCAGTTCAAATGTGGTGGTAACTTTTTAGTTCCATCTGGCCTGCGTCTTAATCCCAGCAGTTTCATGGATGTGGTTAATGCAATATCTACACGATGTGCCTTTAGCGTTTGCTATAATCCGAGGGCTAGCTCATCGGAGTTCATAATTCCACTCAAGAAATTTTTGAAGAGCCTCGATCAATTTTATTCAGTTGGGATGAGGTTCAGGATGCGTTTTGAAACCGAAGATGCTGCAGAACGGAGATGCATGGGATTAGTTATTGGAATTAGCGATGCAGATCCTGTAAGATGGCCCGGATCTAAATGGAGATGCCTTATGGTAAGGTGGGAAGACACAGAAACTACTAGGGATAACAGGGTTTCCCTATGGGAAATTGAGCCATCTGGTTCTGCTTCTACTCCCAACAACTTCAATGCAGCTGGTTTAAAGAGGACCAGGATCGGGTTGCCTTCGAAACAAGAATTTCCAGTTCCAAATGGGATTGGAACATCGGACTTTGGGGAATCATTAAGGTTCCAGAAGGTCTTGCAAGGTCAAGAAATTTTGGGTGCTAATATTCCTTTTGATGGTATCAGTGCTCAGAGTCGCCCCTTTTCTGAAATACGGAGGCAGTATCCTGGTTCGAGCTTTTCTGGGATCGCCCCTTCAGGAAATAATTTCACAATTCCACAAGTGCATTCTGATGGTCTGTGCATTGGCATAGGCTTCAGCGAATCGTTTCGATTCCAGAAGGTCTTGCAAGGTCAAGAAATACTTCCAAGCCAACCATATGGAAGAACTTTTGCAGGTAATGATCAAGGAAATGGTCGCCATGGAATTTTTGACAGTTGTCAGATGTTGGGTTCCAGAAATGGATGGACCACCTCACTACAGGATAATAATTCTGCCAATTTGCACCCTTCTGTTCCATCCGGGCAAGTGTCATCTCCATCATCTGTCTTCATGTTCCAGCAAGCAGTGAATCCTACTCCTAACTGTGACTACAATAATGGCATCACATATCAGAGAATGGAGAGTAAAATGCAATATCAAGGACTGCATGCTTCTGAAATCAATGGTGGAAAATTTTCATCAGTCTCATCTTATGAGCCTAGTTTCTGTGGGCAAACTCAGGGAAGGACTAAATCTATGGGCATGTTCGTGCGTGATCAAATGGAGGCTTCACCATCTCACGATTCTCTATCGCCGTGGAGAGATGGTCAAGAGCTGATCTCCTCCTACAAAAGTAGCTGCAGACTCTTCGGATTTTCATTGACTCAGGAAAATCACATTGCAAATTGCAAATGA 2040 0.4642 MGLIDLNTTEDDETPSSGSSASLSSRSGISISASTSPSSVCLKLWHACAGPMITLPKKGSMVVYFPQGHLEQQARDFPVSAYNIPPHVFCRVADVKLHAEEGMDEGYCQVSLVPESEQAERRFRGGEIDADSEDEDAAAAVKSTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPRLDYNQQRPSQELVAKDLHGLEWKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRAEDGVLRLGIRRASQFKCGGNFLVPSGLRLNPSSFMDVVNAISTRCAFSVCYNPRASSSEFIIPLKKFLKSLDQFYSVGMRFRMRFETEDAAERRCMGLVIGISDADPVRWPGSKWRCLMVRWEDTETTRDNRVSLWEIEPSGSASTPNNFNAAGLKRTRIGLPSKQEFPVPNGIGTSDFGESLRFQKVLQGQEILGANIPFDGISAQSRPFSEIRRQYPGSSFSGIAPSGNNFTIPQVHSDGLCIGIGFSESFRFQKVLQGQEILPSQPYGRTFAGNDQGNGRHGIFDSCQMLGSRNGWTTSLQDNNSANLHPSVPSGQVSSPSSVFMFQQAVNPTPNCDYNNGITYQRMESKMQYQGLHASEINGGKFSSVSSYEPSFCGQTQGRTKSMGMFVRDQMEASPSHDSLSPWRDGQELISSYKSSCRLFGFSLTQENHIANCK 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0813 679 Pfam Auxin response factor 276 356 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele13g0813 679 MobiDBLite consensus disorder prediction 1 28 - -
Lele13g0813 679 SUPERFAMILY DNA-binding pseudobarrel domain 142 251 IPR015300 -
Lele13g0813 679 FunFam Auxin response factor 312 383 - -
Lele13g0813 679 MobiDBLite consensus disorder prediction 9 28 - -
Lele13g0813 679 SMART B3_2 149 251 IPR003340 GO:0003677
Lele13g0813 679 Gene3D - 312 385 - -
Lele13g0813 679 Pfam B3 DNA binding domain 149 250 IPR003340 GO:0003677
Lele13g0813 679 FunFam Auxin response factor 147 251 - -
Lele13g0813 679 Gene3D - 147 250 IPR015300 -
Lele13g0813 679 CDD B3_DNA 147 249 IPR003340 GO:0003677
Lele13g0813 679 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 39 674 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lele13g0813 679 ProSiteProfiles B3 DNA-binding domain profile. 149 251 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0813 Lele-ChrLele13 19873362 19878078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0813 36 514 B3 DNA Binding Superfamily AT5G60450 48.984 1.64e-141 430
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lele13g0813 B3 8.1e-22 CL0405