Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0812 ATGCATCAAGCCATTCCATATAGGACCTGGCTCCCCGCCGGAGCACGTGCCTCACTTGACCTTTCTACTGCGGTGGTGACCCCTGGCGTGTTCTCCGGAGGAATTACTGGACAGGCCGATGGTGTTGATCCCGGTACCCTGGCGACGATGATATCGGAGAACGCGGTGATAATAATCGGAAAACGCGGGTGCTGCATGTGCCACGTTGTGCAGAGCTTGTTACAAGGTCTTGGCGTGAACCCTCCCGTGTACGAGGTAGCTGAGGCAGAGGAGGCCGCCGTCGTCGGCGAGCTGTCCAGGAAGATTGGGTTCTGTGGCGGCGTCGAAGGAGTCCAGTTCCCGGCGGTGTTTGTGGGAGGGAAGTTGTTTGGAGGATTGGAAAGAGTGATGTCCACACATATCTCCGGCGAGCTGGTTCCGATCCTGAAGGACGCCGGGGCCTTGTGGCTCTGA 453 0.585 MHQAIPYRTWLPAGARASLDLSTAVVTPGVFSGGITGQADGVDPGTLATMISENAVIIIGKRGCCMCHVVQSLLQGLGVNPPVYEVAEAEEAAVVGELSRKIGFCGGVEGVQFPAVFVGGKLFGGLERVMSTHISGELVPILKDAGALWL 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0812 150 PANTHER GLUTAREDOXIN 48 150 IPR011905 -
Lele13g0812 150 TIGRFAM GlrX-like_plant: glutaredoxin-like family 48 150 IPR011905 -
Lele13g0812 150 Pfam Glutaredoxin 56 122 IPR002109 -
Lele13g0812 150 Gene3D Glutaredoxin 45 149 - -
Lele13g0812 150 ProSiteProfiles Glutaredoxin domain profile. 44 149 - -
Lele13g0812 150 SUPERFAMILY Thioredoxin-like 47 149 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0812 Lele-ChrLele13 19865545 19865997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0812 46 150 Miscellaneous Gene Families AT4G15700 43.810 1.25e-25 92.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0812 13 19865545 19865997 Lele13g0807 13 19825420 19834510 CCT
Lele13g0812 13 19865545 19865997 Lele14g0697 14 18197049 18205890 CCT
Lele13g0812 13 19865545 19865997 Lele15g1672 15 9963121 9972214 CCT
Lele13g0812 13 19865545 19865997 Lele16g1709 16 9943797 9952800 CCT
Lele13g0812 13 19865545 19865997 Lele13g0812 13 19865545 19865997 ECH
Lele13g0812 13 19865545 19865997 Lele14g0703 14 18251604 18252068 ECH
Lele13g0812 13 19865545 19865997 Lele15g1667 15 9927438 9927878 hybridization
Lele13g0812 13 19865545 19865997 Lele16g1703 16 9888867 9889331 hybridization