Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0808 ATGGATGTCTCTGCTTCTCCTTTCTTTCTCCTTCACATATCTTTCCCTCGCGATAAGGGGGCCCCACTTATCCTCCTCCCTCCCTCCCCACTGCTCCTCCCTCCACCATTTCCCCTGCTCCCTCCCATCTCTCACCCTCCGCTCCCCATCCAACGCTACCCGTCCTCCCATCTCCTCTCCCTGGTCGCACCAGATCACACCCCCGTCAGACAGTTAAACCACCACACAAGAACTGTTCCTGTACTTTGCTCTGTCAAGATATCGGTTCCGAGCCATTCCCACCCTTCCTCCTCCTCCTCCTCTATATTAAAGCTACATTTGTTGTTTTTCCCGGTTGGTTCTTCTCTCTGTTTCGCGCTTGATTCCATGGAGTCGCGAGTGTTGTCACGCGCCACCGCCTTCTCCTCCTCCTCTCCCTCCCTCCCCCACCTCCGCAGGCTCTGGCGCGACTCCCACAATGCTTCCTTCCTCTCCGTCAAGCCGATCGGGGCTGTTGCCGATGGCGGCAATCTTATCTGGGGAAGGCAGCTCCGTCCCGCGCTCTGCTCGCCGGCCTTGAGGAAGGACGCTCCCCTTCGGCCTTGCCTCGCCGCTGCCTCCTCTCCGGCTGAAGGAAGTGATTCCGCCGGGGAGGCGAAAGTGGCTCCAGCTGGGTTTTTCGATAAGTATCCGGCGCTGGTGACTGGATTCTTCTTCTTCATGTGGTACTTCTTGAATGTGATCTTCAACATCCTCAACAAGAAGATCTATAATTACTTCCCTTATCCATACTTCGTTTCGGTTATCCATTTATTCGTGGGTGTGGTGTACTGTCTTGTGAGCTGGGCCGTGGGCCTACCCAAGCGAGCTCCAATAGACTCAAACCTGCTGAAGGTGCTGATTCCTGTGGCAGTGTGTCACGCACTAGGCCACGTGACCAGCAATGTGTCATTCGCAGCTGTTGCAGTTTCCTTCACACACACCATTAAAGCTTTGGAGCCATTCTTCAATGCTTCTGCTTCCCAATTCATACTTGGCCAGCCAATTCCTATTACCCTGTGGCTCTCTCTGGCTCCTGTTGTTATTGGTGTGTCAATGGCTTCACTGACTGAGCTCTCGTTCAACTGGACTGGTTTTATAAGCGCTATGATTTCAAACATTTCATTCACATATCGCAGTATTTATTCAAAGAAAGCTATGACTGATATGGACAGCACAAATGTGTACGCCTACATCTCCATCATTGCCTTAATTGTCTGCATACCACCAGCCATAATTCTTGAGGGGCCTGCACTTATGAAGGGTGGGTTCAGTGATGCAATTGCTAAAGTTGGTACTGTCAAGTTCGTGTCAGATCTTTTCTGGGTCGGAATGTTCTACCACCTCTACAATCAGCTGGCCACCAACACTTTGGAGAGGGTGGCTCCTCTGACTCATGCTGTTGGGAATGTACTGAAACGTGTGTTTGTGATTGGCTTCTCAATCATAGTCTTCGGTAACAAGATCTCCACCCAAACTGGTATTGGAACCTGCATTGCAATTGCAGGAGTGGCCATCTATTCTCTCATCAAAGCCAGGATGGAAGAGGCGAAACGACAAGCGAAAGCAGCATAA 1593 0.5135 MDVSASPFFLLHISFPRDKGAPLILLPPSPLLLPPPFPLLPPISHPPLPIQRYPSSHLLSLVAPDHTPVRQLNHHTRTVPVLCSVKISVPSHSHPSSSSSSILKLHLLFFPVGSSLCFALDSMESRVLSRATAFSSSSPSLPHLRRLWRDSHNASFLSVKPIGAVADGGNLIWGRQLRPALCSPALRKDAPLRPCLAAASSPAEGSDSAGEAKVAPAGFFDKYPALVTGFFFFMWYFLNVIFNILNKKIYNYFPYPYFVSVIHLFVGVVYCLVSWAVGLPKRAPIDSNLLKVLIPVAVCHALGHVTSNVSFAAVAVSFTHTIKALEPFFNASASQFILGQPIPITLWLSLAPVVIGVSMASLTELSFNWTGFISAMISNISFTYRSIYSKKAMTDMDSTNVYAYISIIALIVCIPPAIILEGPALMKGGFSDAIAKVGTVKFVSDLFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIGFSIIVFGNKISTQTGIGTCIAIAGVAIYSLIKARMEEAKRQAKAA 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0808 530 Pfam Triose-phosphate Transporter family 227 514 IPR004853 -
Lele13g0808 530 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 226 524 IPR004696 GO:0016020|GO:0022857|GO:0055085
Lele13g0808 530 SUPERFAMILY Multidrug resistance efflux transporter EmrE 269 363 - -
Lele13g0808 530 Coils Coil 513 530 - -
Lele13g0808 530 PANTHER SOLUTE CARRIER FAMILY 35 229 521 - -
Lele13g0808 530 SUPERFAMILY Multidrug resistance efflux transporter EmrE 446 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0808 Lele-ChrLele13 19839163 19843041 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0808 123 528 Antiporters AT5G46110 78.177 0.0 632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0808 13 19839163 19843041 Lele15g1671 15 9954124 9957995 hybridization
Lele13g0808 13 19839163 19843041 Lele16g1708 16 9936896 9940774 hybridization