Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0807 ATGGAGGCCGAGTCTGTTTCAGACGGGGAGAACAATCGGAAAAGGGATGCCGCTGATGATTACAATGACAATAATAATGGATGTAACAAAAAAATTGTAAATTCCAATGAAGGGCAGAGCAAGCCCAAGCGTCAGATGAAGACTCCTTTCCAGCTTGACGCCCTAGAGAAAGCTTATGCTTTGGAGATGTACCCATCGGAGGCGATGAGGGCAGAACTGTCACAGAAGTTGGGGCTGTCGGATCGGCAATTGCAGATGTGGTTCTGCCATAGGAGGTTGAAAGACAAGAAGGATGTGCCTAAGTCTTCAAGAAAGGCGCCACTGCAGTTGCCCGCTTCACCGACGGACGACTTGAGGATGGAGACTGAACTTGCCAATGATTATGGATCCGGGTCGGGTTCGGGCTCAAGCCCGTTCACGCGTTCAGAGTTGAGGAATGTGGTACCTGGGGGTGTTCCTGGGTACTATGAGTCACAGCAGGCTCTTACGGAGCTCAGAGCAATTGCTTGTGTGGAGGCACAATTAGGAGAACCCTTGAGGGAAGATGGACCTATTTTAGGAGTTGAGTTTGATCCATTGCCGCCAGATGCATTTGGAGCACCTATAGCAGTTACTGAGCAGCAGAAGCGGCCTAGTCTTGGCTTTGATAGTAAAGTCTATGAAAGACATGACGTTAGATCAAATAAGGATATGACAAGGACTTTCCATGAATATCCATTTCTCCCAAACCACTCCAGTATTAGATCTGATGCTTATGGACAATTGACACAATCTCATTTGCTTGATCCGATGGATGGTCCGGCAAGAACACCATCTTTTGTAGTAAAAAATGAACAGCTTCCCAGGCTCCGCGCTGCCCAAGGTCATTTGTCACGTGTTCGTGGTTCATCTTTACATGATAAGCCAGGTCTTCCATTTCCATCACCCCCTCGTGATGATGATGGCCCCTCTCAAAGGGAATCTTACACAAAGCTAAATATTGGAATCAACTCTCACTTTACTGCTCACCCTATTGCTGGACCAGAAAACCCTTATGCTGTCGTAGGTGGACAAGTTTTCCATGGCGATGCAATATTACGGGCAGACAGGAAACGAAAGAGTGATGATTCTAGAGCTGCAAGAGAAGCTGAAGCCCACGGGATGAGGATCCAGAAGGTGATAGAGAAACAAGATAACATTAGGCGAAAGAATGAAGAAAGAATGAGGAAAGAGATGGAGAGGCAAGATCGTGAACGAAGGAAAGAAGAAGAGAGGTTGATGCGTGAGAGACAAAGAGAAGAAGAAAGAACAAAGCGTGAGCAAAAGCGTGAAATTGAGCGGAGGGAAAAGTTTCTGATGAAAGAAAATTTAAAAGCTGAGAAAAGGAGGCAAAAAGAAGAGCTTCGAAAAGAGAAAGAATCAGAGAGAAGGAAAGCTGCTCTTGAGAAGGCAGTTGCCCGCAGAATAGCTAAAGAATCTATGGAGCTTATTGAGGACGAACAACTGGAATTGATGGAGTTGGCTGTGGCAAGCAAGGGACTTCCCTCAATTATAAATCTTGATCTTGAAACTTTGCAAAACCTTGATATATTTCGGGATTCATTGTGCATTTTTCCACCTAAGGGTTTAAAGCTGAAAAAACCATTAGCCATCCAACCCTGGATCAAATCTGAGGAGCATGTTGGCCACCTTCTCATGGTTTGGAGATTTCTGATTACATTTGCAGATGTCCTCGAGTTGTGGCCTTTTACTCTTGATGAGTTTTTGCAGGCATTTCATGACTATGATTCAAGATTATTTGGTGAAATACATGTTGCTCTTCTCAAGGTGATAATAAAGGACATTGAAGATGTTGCAAGGTCGCCTACAGGATTAGGTACAAACCAGAATGGGGCTGCTAATCCTGGGGATGGCCATCCAGAGATTGTGGAAGGGGCATATGCATGGGGCTATGATATAAGAAATTGGCAGAAGCACTTGAATCAATCAACATGGCCAGAAATTTTCCGACAGTTAGCATTGTCTGCAGGGTTTGGACCACGGTTGAAGAAAAGAAATATCGCATGGTCATATGCAAATGATAAAGACGAGCTGGGTAGAAGTTGTGAAGACATCATCTCCACACTTCGCAATGGTTCGGCAGCTGAAAATGCAGTGGCAAAAATGCAAGAGAAAGGTCTATTAGCTCCTCGGAGAAATAGGCATCGGTTGACTCCTGGAACAGTCAAGTTTGCAGCATTTCATGTTTTGTCTCTTGAGGGTAGCAAGGGGCTGACAGTACTAGAGCTTGCAGAGAAAATTCAGAAATCTGGACTTCGGGACCTGACAACCAGCAAGACTCCTGAGGCATCAATTTCTGTTGCTTTGACTAGAGATGCTAAGCTTTTTGAAAGAATAGCTCCCTCAACATATCGAGTTCGTGCTGCATACAGAAAAGATCCTGCTGATGCGGAGGCCATTCTTTCAGACGCTAGAAAGAAAATTCAGATATTTGAAAATGGGTTTCCTGCTGTTGAAGATGCTGATGATGTTGAAAGAGAAGAAGAGTCGGAAAGTGATGAAGTTGATGAGGATCCTGAAGTAGATGATTTAGTAAATCCCCTAAGTGATAACAAAACATCTGAACAGTATGATGACCTGAACAATTGCTCTACAAATGGAAGAGAGAATATGAGCCATGACATGGAACTTATTCAAAATGAGTTTGGCAAGGATCTTCCTTGTGTTCCTGAGAATTTTTCCAAGGATGCTGATTGCCCAAGTGCCATCACTGGACAACGGGTTGTTGTTGAAGATTTGAATACTGGAAATCCTGAAGATAATATGGAAATTGATGAAAGCAAGTTTGGAGAGTCATGGGTTCAAGGTCTTACAGAAGGAGATTATTCTGACCTTAGTGTAGAAGAACGTCTTAATGCTCTAGTAGCATTAGTTGGTGTTGCAAATGAAGGAAATTCAATACGTCTTGTTCTTGAGGACCGTTTGGAGGCAGCAAATGCTCTGAAGAAGCAAATGTGGGCAGAAGCACAGATAGATAAAGTTCGGCAGAATTATGATAATTCTAATAAATTAGATTTACCATCTCTTACTGCAAATAAAGTTGAGACACAATATACGGGCCCTGCTGCGGAGGGAAACCAGAGCCCATTGCTTGACATCAATATTAATAATAATGAGGCATCACCCAGCACTGCAGAAAATCAAAAAGAAGTTCTTGCTGCACAGAACACGCCTATTGAAAAGCCCCCAGTTGTTCAAGATCTCGTTATAAGTCCAGACAATCCACAGATTCTATCTGCACATGCTTCAAAAAGGTCTCGTTCACAGTTGAAGTCCTATATTGCACATATAGCAGAAGAGATGTATGTATATAGGTCCTTGCCCCTTGGTCAAGATCGGAGACGTAACCGTTATTGGCAATTTGTTGCATCTGCTTCCAGCAGTGATCCTGGTGCTGGCAGGGTCTTCGTTGAATTACATGATGGCAGTTGGAGGCTTATTGATTCAGAAGAGGACTTCGATGCACTTTTGATATCCCTTGATTCACGTGGAATAAGGGAATCTCATTTACGCTTAATGTTGCAGAAGATTGAGAATTCCTTCAAGGAAAATGTTCGAAAGAATGCTCAATTTTGTAAAGTTGCTACAAAAACAATTAAAAATGAAGCTGATGAAGTAGAATTGGTTCCTGAATGCCGTGCTGGATCAGACAGTTCTAGCAGTACACTTTGTGGTTTGAATTCTGACAGTACATTGGAAACTTCGTCATCCTTTAAAATTGAGCTGGGGAGAAGTGAGGGTGAAAAAAAGGCCTCCTTGACCAAGTATCAAGATGTTCAAAAGTGGATATGGAAAGAATGTTATAATTCATCAACGTTATATTCAATGAAATATGGGCAAAGGAGATGCAAACGCCTTCTGGAAATATGCGATATGTGTTTGAATCCATATTTCTTTGAAGATTACCATTGTATCTCTTGCCACCATACTTTTGCTGCTGATAATGGATTGAATTTTTCTAAACATGCATTTCAATGTGGAGAGAAGATAGATTCCAAAGGTCTTTGCACTTGGGATTCTTCTCTTCCCTTGCGGATTAGGTTGCTCAAGGCCTTGTTGGCTTGTATTGAGGCTTCTGTTCCTCTTGAAGCATTACAATCAATTTGGACAGAAGAGAATAGGAAGCAGTGGGGTGTGAAGTTGAGCAAATCATCTACAACTGATGAACTCTTACAGTTATTGACCTTGTTGGAGAGAGCAGTACAGCGAGACTTTCTGTCATCGAACTTCTCTACAACAGAAGAAATGTTGGGATCAAATTGTATACCAGATGATGCTGTAAATGCTTCTGCTGATACTGAATCAGTTCCTGTGCTGCCATGGGTCCCACAAACCACTGCAGCTGTGTCATTGAGAATATTTGAGTTTGATGCATCCATCAGTTACATACCGTCTGAGAAACCCGAGCTACCTTGTGAGGAGAAAGAAGTGAGGGAATACGTGAAGCTTTCTTCCAGATATGCTCCCTTCAAATCTGGTAGAGCAATTGAATCAGCAGAATTAGACCATGATGAATTCATCAAGGAAGACAAATCTTATAAAAGTGCCCGAGGCAGGAATAAACGTGGACGAGGATGTCATGATCAGGGGCGGGGCAAGAAGTTGTCTAGAAGAATGCAAGAGCCAAAACAACTTTCCGGACGCCGAAATGTTAAAGGCACTGAAAATTTGGGTCAAGGATTAAAACAGCAGGGGAGAGGGGCACAAGGACAGCCTGGTGGACGTGGTCGCCGAACAGTCAGGAAAAGAAGAGTGGAGAGAAGGGCCGTCGTTGAGGACTTATTGCTGGGCCACAAGGGGGTCAGTCGTAGTCCCAAAATTGGTAGAGAATCATTGAGAAGTTTGGAAGAGGAATGGTATGGCGAGAAGGAAACAAGTCCCATCCAAATGGATGGTGTTGATAATAGTAACAGTGCTGAGGAAGTGGAATCTGACGACAATGGGCAAGCAGTGGAGTATGAGCAAGGAAACTGGGAGGTAGGTTTCAATGGTGATAGTTCCAACAGCAGATGGGATAGGGATTTGGTTGAAGCCAGCGATGAAGAAGTGGTCGGTGCTTCTGAAGATGACAACGGCGTTGAAGAGGGAGAAGAGTTGGAAGAAGATTCAGAAGAGGTTATGAGTGAGGGAGAGGATTCAGATGGTATGGGCAATAGAATGATGGTAAATGAAGAAGGCTCAGACTCAGCTGTCTCTGAGGATTCTTCTGATTAG 5253 0.4333 MEAESVSDGENNRKRDAADDYNDNNNGCNKKIVNSNEGQSKPKRQMKTPFQLDALEKAYALEMYPSEAMRAELSQKLGLSDRQLQMWFCHRRLKDKKDVPKSSRKAPLQLPASPTDDLRMETELANDYGSGSGSGSSPFTRSELRNVVPGGVPGYYESQQALTELRAIACVEAQLGEPLREDGPILGVEFDPLPPDAFGAPIAVTEQQKRPSLGFDSKVYERHDVRSNKDMTRTFHEYPFLPNHSSIRSDAYGQLTQSHLLDPMDGPARTPSFVVKNEQLPRLRAAQGHLSRVRGSSLHDKPGLPFPSPPRDDDGPSQRESYTKLNIGINSHFTAHPIAGPENPYAVVGGQVFHGDAILRADRKRKSDDSRAAREAEAHGMRIQKVIEKQDNIRRKNEERMRKEMERQDRERRKEEERLMRERQREEERTKREQKREIERREKFLMKENLKAEKRRQKEELRKEKESERRKAALEKAVARRIAKESMELIEDEQLELMELAVASKGLPSIINLDLETLQNLDIFRDSLCIFPPKGLKLKKPLAIQPWIKSEEHVGHLLMVWRFLITFADVLELWPFTLDEFLQAFHDYDSRLFGEIHVALLKVIIKDIEDVARSPTGLGTNQNGAANPGDGHPEIVEGAYAWGYDIRNWQKHLNQSTWPEIFRQLALSAGFGPRLKKRNIAWSYANDKDELGRSCEDIISTLRNGSAAENAVAKMQEKGLLAPRRNRHRLTPGTVKFAAFHVLSLEGSKGLTVLELAEKIQKSGLRDLTTSKTPEASISVALTRDAKLFERIAPSTYRVRAAYRKDPADAEAILSDARKKIQIFENGFPAVEDADDVEREEESESDEVDEDPEVDDLVNPLSDNKTSEQYDDLNNCSTNGRENMSHDMELIQNEFGKDLPCVPENFSKDADCPSAITGQRVVVEDLNTGNPEDNMEIDESKFGESWVQGLTEGDYSDLSVEERLNALVALVGVANEGNSIRLVLEDRLEAANALKKQMWAEAQIDKVRQNYDNSNKLDLPSLTANKVETQYTGPAAEGNQSPLLDININNNEASPSTAENQKEVLAAQNTPIEKPPVVQDLVISPDNPQILSAHASKRSRSQLKSYIAHIAEEMYVYRSLPLGQDRRRNRYWQFVASASSSDPGAGRVFVELHDGSWRLIDSEEDFDALLISLDSRGIRESHLRLMLQKIENSFKENVRKNAQFCKVATKTIKNEADEVELVPECRAGSDSSSSTLCGLNSDSTLETSSSFKIELGRSEGEKKASLTKYQDVQKWIWKECYNSSTLYSMKYGQRRCKRLLEICDMCLNPYFFEDYHCISCHHTFAADNGLNFSKHAFQCGEKIDSKGLCTWDSSLPLRIRLLKALLACIEASVPLEALQSIWTEENRKQWGVKLSKSSTTDELLQLLTLLERAVQRDFLSSNFSTTEEMLGSNCIPDDAVNASADTESVPVLPWVPQTTAAVSLRIFEFDASISYIPSEKPELPCEEKEVREYVKLSSRYAPFKSGRAIESAELDHDEFIKEDKSYKSARGRNKRGRGCHDQGRGKKLSRRMQEPKQLSGRRNVKGTENLGQGLKQQGRGAQGQPGGRGRRTVRKRRVERRAVVEDLLLGHKGVSRSPKIGRESLRSLEEEWYGEKETSPIQMDGVDNSNSAEEVESDDNGQAVEYEQGNWEVGFNGDSSNSRWDRDLVEASDEEVVGASEDDNGVEEGEELEEDSEEVMSEGEDSDGMGNRMMVNEEGSDSAVSEDSSD 1750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0807 1750 SMART HOX_1 40 102 IPR001356 GO:0003677
Lele13g0807 1750 Pfam DDT domain 552 607 IPR018501 -
Lele13g0807 1750 MobiDBLite consensus disorder prediction 359 435 - -
Lele13g0807 1750 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 942 982 IPR028942 -
Lele13g0807 1750 MobiDBLite consensus disorder prediction 830 882 - -
Lele13g0807 1750 MobiDBLite consensus disorder prediction 1694 1724 - -
Lele13g0807 1750 MobiDBLite consensus disorder prediction 1033 1060 - -
Lele13g0807 1750 ProSiteProfiles 'Homeobox' domain profile. 38 98 IPR001356 GO:0003677
Lele13g0807 1750 ProSiteProfiles DDT domain profile. 551 610 IPR018501 -
Lele13g0807 1750 MobiDBLite consensus disorder prediction 1 49 - -
Lele13g0807 1750 MobiDBLite consensus disorder prediction 834 857 - -
Lele13g0807 1750 MobiDBLite consensus disorder prediction 22 46 - -
Lele13g0807 1750 MobiDBLite consensus disorder prediction 1560 1579 - -
Lele13g0807 1750 ProSiteProfiles HARE-type HTH domain profile. 733 802 IPR007759 GO:0006355
Lele13g0807 1750 SUPERFAMILY Homeodomain-like 32 97 IPR009057 -
Lele13g0807 1750 MobiDBLite consensus disorder prediction 98 118 - -
Lele13g0807 1750 MobiDBLite consensus disorder prediction 1525 1598 - -
Lele13g0807 1750 Pfam Homeodomain 41 97 IPR001356 GO:0003677
Lele13g0807 1750 MobiDBLite consensus disorder prediction 1629 1750 - -
Lele13g0807 1750 MobiDBLite consensus disorder prediction 860 882 - -
Lele13g0807 1750 MobiDBLite consensus disorder prediction 1525 1558 - -
Lele13g0807 1750 SMART testlast3 551 610 IPR018501 -
Lele13g0807 1750 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1118 1190 IPR028941 -
Lele13g0807 1750 Pfam HB1, ASXL, restriction endonuclease HTH domain 733 801 IPR007759 GO:0006355
Lele13g0807 1750 MobiDBLite consensus disorder prediction 1 21 - -
Lele13g0807 1750 CDD homeodomain 43 97 IPR001356 GO:0003677
Lele13g0807 1750 Coils Coil 393 478 - -
Lele13g0807 1750 MobiDBLite consensus disorder prediction 288 321 - -
Lele13g0807 1750 Gene3D - 27 100 - -
Lele13g0807 1750 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 26 1750 IPR044977 GO:0006357
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0807 Lele-ChrLele13 19825420 19834510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0807 7 1678 Homeobox Transcription Factor Family AT1G28420 49.568 0.0 1349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Lele13g0807 WSD 6.3e-14 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0812 13 19865545 19865997 Lele13g0807 13 19825420 19834510 CCT
Lele14g0703 14 18251604 18252068 Lele13g0807 13 19825420 19834510 CCT
Lele15g1667 15 9927438 9927878 Lele13g0807 13 19825420 19834510 CCT
Lele16g1703 16 9888867 9889331 Lele13g0807 13 19825420 19834510 CCT
Lele13g0807 13 19825420 19834510 Lele13g0801 13 19798710 19799635 CCT
Lele13g0807 13 19825420 19834510 Lele14g0691 14 18168855 18171090 CCT
Lele13g0807 13 19825420 19834510 Lele15g1678 15 9997347 9998297 CCT
Lele13g0807 13 19825420 19834510 Lele16g1714 16 9981296 9984081 CCT
Lele13g0807 13 19825420 19834510 Lele13g0807 13 19825420 19834510 ECH
Lele13g0807 13 19825420 19834510 Lele15g1672 15 9963121 9972214 hybridization
Lele13g0807 13 19825420 19834510 Lele16g1709 16 9943797 9952800 hybridization