Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0806 ATGGGTGTGGATTATTATAAGATTCTTCAGGTTGACAAGAATACCACAGAGGAAGATCTGAAGAAAGCTTACCGAAAGCTTGCCATGAAATGGCACCCTGATAAGAACCCAAACAATAAGAAAGACGCTGAGGCCAAATTCAAACAAGTCTCAGAAGCCTACGAGGTAAAGCTAGTTATCGATTACTTCCTTCACTTTAAGAACATTAATCAATTGTTTGTCGATGTTATTCAATCTCTATTAGCTCGTCCATTTACCAAAAAAACTTTACCAGTGGAGGAAATCTTAACCATTGAAATCAAACCGGGTTGGAAGAAGGGGACGAAGATCACGTTCCCGGAGAAAGGGAACGAACAACCAAATGTGATTCCTGCAGATCTGATATTCATCATCGATGAGAAACCGCACAGTGTGTTTACAAGGGATGGTAATGATCTGGTAGTGACACAGAAGATAACACTTGCAGAAGCTCTAACAGGCTACACTGTGCATCTCACGGCGCTGGATGGAAGGACTCTGAACATTCCCATAAACAACGTAATACATCCAACCTATGAAGAGGTTGTCCCACAGGAAGGCATGCCAATTCCAAAAGAACCGTCAAGGAGGGGCAACCTTAGGATTAAGTTCAATATCAAATTCCCAACAAGGTTGACATCGGACCAGAAAGCTGGAATTAAGAAACTTTTAGGGTCATAA 699 0.4163 MGVDYYKILQVDKNTTEEDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQVSEAYEVKLVIDYFLHFKNINQLFVDVIQSLLARPFTKKTLPVEEILTIEIKPGWKKGTKITFPEKGNEQPNVIPADLIFIIDEKPHSVFTRDGNDLVVTQKITLAEALTGYTVHLTALDGRTLNIPINNVIHPTYEEVVPQEGMPIPKEPSRRGNLRIKFNIKFPTRLTSDQKAGIKKLLGS 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0806 232 FunFam DnaJ subfamily B member 13 136 216 - -
Lele13g0806 232 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 56 - -
Lele13g0806 232 SUPERFAMILY Chaperone J-domain 3 66 IPR036869 -
Lele13g0806 232 SMART dnaj_3 3 71 IPR001623 -
Lele13g0806 232 SUPERFAMILY HSP40/DnaJ peptide-binding domain 138 224 IPR008971 GO:0006457|GO:0051082
Lele13g0806 232 CDD DnaJ_C 92 218 - -
Lele13g0806 232 ProSiteProfiles dnaJ domain profile. 4 62 IPR001623 -
Lele13g0806 232 Gene3D - 73 135 - -
Lele13g0806 232 FunFam Dnaj homolog subfamily b member 77 134 - -
Lele13g0806 232 Pfam DnaJ domain 4 56 IPR001623 -
Lele13g0806 232 Gene3D - 136 216 - -
Lele13g0806 232 SUPERFAMILY HSP40/DnaJ peptide-binding domain 93 136 IPR008971 GO:0006457|GO:0051082
Lele13g0806 232 Gene3D DnaJ domain 1 72 IPR036869 -
Lele13g0806 232 CDD DnaJ 4 56 IPR001623 -
Lele13g0806 232 PRINTS DnaJ domain signature 24 39 IPR001623 -
Lele13g0806 232 PRINTS DnaJ domain signature 6 24 IPR001623 -
Lele13g0806 232 PRINTS DnaJ domain signature 42 62 IPR001623 -
Lele13g0806 232 Pfam DnaJ C terminal domain 92 215 IPR002939 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0806 Lele-ChrLele13 19822234 19823784 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0806 4 71 Miscellaneous Gene Families AT5G49580 37.209 7.12e-07 47.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0806 13 19822234 19823784 Lele13g0806 13 19822234 19823784 ECH
Lele13g0806 13 19822234 19823784 Lele15g1673 15 9973430 9976980 hybridization
Lele13g0806 13 19822234 19823784 Lele16g1710 16 9957031 9958698 hybridization