Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0788 ATGCCCTTCTTCTTCCTCAAGAACCCTCTGGCCTCCAAGATGAAGAAAGGTATCAGAACTACTTTCTGCAACACCGACGGCTCAACCTCCACTCTGAACCAACAACACAGTACCACTACTAATAATGACGAAAATCCAAGGCAAAGCTTATCACCAACTTTGGAGGATCTGATTCTACAGTTAGAGCTGGAGGAAGAGATTGCTAGGAAATCTAAGCTCAATAATCACTACAACGATGGAATCATGAGGGGAAGAATGTCATCTGTGAACAACTCAGACATCTTAAGATCTGCTCAAAACGCCTTGAATCATTATCCAAGATTCTCGCTTGACGGTAGGGATGCCATGTACCGATCTAGGTTTGGAACCCAAGAAGGAAGAAACTCGGTTTGCTGTGAGAGAACCTTGGGAAGAAGGTTTCTGCTTGAAGAAGAGGAGGAAGAAGACGAAGAGAAGTATGGGTTAAGGAGGAATAATAATAATAGGTTTAAAAAGACTCTGCCTTTGCCTGCAACTCTAGCAGGAGAGAGTGTGGTGTGGTGTGAGCCAGGGGTTGTGGCTAAGCTGATGGGTTTGGAAGCCATGCCAGTGCCAGTGAGTAGCTGCAGAAGATCCTTAGAGATTAGCAGAAAGGAGAAGTTCATGATGAGAAGGCAAAATCTGAGAAGGAGATTTGAGAGACATGACTTGGAGAGAAGACTGGCCGCCATGGAAATGCAGGGTTATAATAATGGTGGTGAGACGACCAGGAAGAACAAGAATGAATACTGCTCAACAAATGAGTATTGTATTATGAAACCAGTTTTCCACTAG 813 0.4416 MPFFFLKNPLASKMKKGIRTTFCNTDGSTSTLNQQHSTTTNNDENPRQSLSPTLEDLILQLELEEEIARKSKLNNHYNDGIMRGRMSSVNNSDILRSAQNALNHYPRFSLDGRDAMYRSRFGTQEGRNSVCCERTLGRRFLLEEEEEEDEEKYGLRRNNNNRFKKTLPLPATLAGESVVWCEPGVVAKLMGLEAMPVPVSSCRRSLEISRKEKFMMRRQNLRRRFERHDLERRLAAMEMQGYNNGGETTRKNKNEYCSTNEYCIMKPVFH 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0788 270 Pfam DUF761-associated sequence motif 179 196 IPR032795 -
Lele13g0788 270 PANTHER DNAK FAMILY PROTEIN 2 268 - -
Lele13g0788 270 MobiDBLite consensus disorder prediction 25 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0788 Lele-ChrLele13 19729397 19730209 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0786 13 19715073 19720179 Lele13g0788 13 19729397 19730209 CCT
Lele14g0676 14 18071951 18077006 Lele13g0788 13 19729397 19730209 CCT
Lele15g1697 15 10076638 10081742 Lele13g0788 13 19729397 19730209 CCT
Lele16g1732 16 10069299 10074984 Lele13g0788 13 19729397 19730209 CCT
Lele13g0800 13 19796195 19797675 Lele13g0788 13 19729397 19730209 CCT
Lele14g0690 14 18165235 18167845 Lele13g0788 13 19729397 19730209 CCT
Lele15g1679 15 9999250 10001395 Lele13g0788 13 19729397 19730209 CCT
Lele16g1715 16 9985100 9987261 Lele13g0788 13 19729397 19730209 CCT
Lele13g0788 13 19729397 19730209 Lele15g1696 15 10070064 10074132 hybridization
Lele13g0788 13 19729397 19730209 Lele16g1731 16 10060395 10064437 hybridization