Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0786 ATGGGGAAGAGTTCAAGTTCGGGATTCAAGGAATATGTAGCCGGTTTGCTCACTGGGGTTGCCACTGTAGCCACGGGCCATCCATTTGACACAGTGAAGTTAGATAAATTCACCATTCAAGGAAAATTTTCATCAAAGAATTATGGTCACACTAATGAAAGCTGCCCCGAAAATAGCAACCTAGTCAACATTGCTGTTTCTACATACACTTTGAGCTGTTCTCTTTGGTATTTCACCGATAAAAAGCCTTCACTTGAAAGGTCGGTTCAAGGTGCTGAACCAAGTTGGGACTTGGCATTGGTAGAGGATCTAACTGAGTACAAAATGTGGGAATATTATTGGCTTCTAAGATGTGGTAATACTTTATGTCATAAACTTTATTGTAGGCTAGTGAAGCTGCAAAAACACAATACTGAAGCACATGGGCTTCAATATAGGAGTGGTTTGCATTGCACTGCTAGGACACTGAAGACTGAGGGAATTAGAGGACTTTATAGTGGAGCAACATCATCTTTTATTGGGATGGCTTTTGAAAGCTCACTGCTTTTTGGCATTTATTCCCAGACAAAACTAGCCCTCCAGTTAGCAAAGCTAGCTCTCCAGGGTGGTGTGCCAAGCAGTGTACCACAGCCTCATGTAATAATACCATCTGCAGCTTATGGCGGTGCAATAATCAGTTTTGTGTTGTGTCCATCAGAGCTGGTGAAGGTGGCTGGAATCTTTCGTGGTGGTTATACAACATTGCTTAGAGAATCTATAGGAAATTCTGTGTTTTTCACTGTTTATGAATATGTGCGTTGTCACTTTTGGTTGGCTGTTTTGCCCCTGGACGTGGCGAAAAATAAAAATTGTCCAAGGAATCCTTTTCAAGTCTTGAGTAATATTTACAGGAGGACTGGATTAAACGGGCTTTACACGGGCTTGGGCCCCACGGTTGCCAGAGCATTTCCTGCTAATGCAGCAGCAATTGTCACCTGGGAGCTAGCAATGAAAATGTTAGGCATTAAACATGACTAA 1017 0.4238 MGKSSSSGFKEYVAGLLTGVATVATGHPFDTVKLDKFTIQGKFSSKNYGHTNESCPENSNLVNIAVSTYTLSCSLWYFTDKKPSLERSVQGAEPSWDLALVEDLTEYKMWEYYWLLRCGNTLCHKLYCRLVKLQKHNTEAHGLQYRSGLHCTARTLKTEGIRGLYSGATSSFIGMAFESSLLFGIYSQTKLALQLAKLALQGGVPSSVPQPHVIIPSAAYGGAIISFVLCPSELVKVAGIFRGGYTTLLRESIGNSVFFTVYEYVRCHFWLAVLPLDVAKNKNCPRNPFQVLSNIYRRTGLNGLYTGLGPTVARAFPANAAAIVTWELAMKMLGIKHD 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0786 338 ProSitePatterns Zinc finger C2H2 type domain signature. 118 141 IPR013087 -
Lele13g0786 338 Pfam Mitochondrial carrier protein 131 194 IPR018108 -
Lele13g0786 338 Pfam Mitochondrial carrier protein 280 334 IPR018108 -
Lele13g0786 338 Gene3D Mitochondrial carrier domain 118 237 IPR023395 -
Lele13g0786 338 ProSiteProfiles Solute carrier (Solcar) repeat profile. 246 332 IPR018108 -
Lele13g0786 338 SUPERFAMILY Mitochondrial carrier 7 327 IPR023395 -
Lele13g0786 338 Gene3D Mitochondrial carrier domain 238 337 IPR023395 -
Lele13g0786 338 ProSiteProfiles Solute carrier (Solcar) repeat profile. 106 192 IPR018108 -
Lele13g0786 338 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 4 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0786 Lele-ChrLele13 19715073 19720179 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0786 131 333 Antiporters AT1G79900 22.780 7.69e-13 66.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0786 13 19715073 19720179 Lele13g0788 13 19729397 19730209 CCT
Lele13g0786 13 19715073 19720179 Lele14g0677 14 18082646 18088632 CCT
Lele13g0786 13 19715073 19720179 Lele15g1696 15 10070064 10074132 CCT
Lele13g0786 13 19715073 19720179 Lele16g1731 16 10060395 10064437 CCT
Lele13g0786 13 19715073 19720179 Lele15g1697 15 10076638 10081742 hybridization
Lele13g0786 13 19715073 19720179 Lele16g1732 16 10069299 10074984 hybridization