Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0785 ATGGAAAGAAGCGGATCAGAGGGAAAGAGGAGCTTCAAGTATAAGGTGGTGGAGGAGGAACAGGAAGTTGAAGATGAAGAGGTTGATGAGTTTAATTTAGGAGAAGACGATGGGACGAATAAGAAGATGAGAGATCTGTATAACAGCAAGAGAGGGTCATCTTCATCATCAATGGCTCCTTCATGTCAGGTTGAAAGCTGTGACAGTGATCTGAGTGAGGCTAAAAACTACCATCGCCGCCATAAGGTCTGTGAGTTCCATGCCAAGGCTGCTTCTGTGCTCATTTCCGGCTTGCACCAAAGGTTTTGCCAACAATGCAGCAGGTTTCATGAGCTGGGAGAATTTGATGACACCAAGAGGAGCTGTAGGAAGCGTTTGGCTGGACACAATGAAAGGCGTCGAAAGAATGCATCTTAA 417 0.4604 MERSGSEGKRSFKYKVVEEEQEVEDEEVDEFNLGEDDGTNKKMRDLYNSKRGSSSSSMAPSCQVESCDSDLSEAKNYHRRHKVCEFHAKAASVLISGLHQRFCQQCSRFHELGEFDDTKRSCRKRLAGHNERRRKNAS 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0785 138 MobiDBLite consensus disorder prediction 34 48 - -
Lele13g0785 138 Pfam SBP domain 62 135 IPR004333 GO:0003677
Lele13g0785 138 Gene3D - 52 123 IPR036893 GO:0003677|GO:0005634
Lele13g0785 138 MobiDBLite consensus disorder prediction 25 62 - -
Lele13g0785 138 SUPERFAMILY SBT domain 60 136 IPR036893 GO:0003677|GO:0005634
Lele13g0785 138 ProSiteProfiles Zinc finger SBP-type profile. 59 136 IPR004333 GO:0003677
Lele13g0785 138 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 49 137 IPR044817 GO:0003677
Lele13g0785 138 FunFam Squamosa promoter-binding-like protein 14 53 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0785 Lele-ChrLele13 19711936 19713407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0785 46 138 SBP-box Gene Family AT2G33810 67.742 4.94e-42 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele13g0785 SBP 4.9e-33 No_clan